RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 PQLC3Q8N755 202 aa25.57■■□□□ 1.68
RFX1-205ENST00000589239 EPAS1Q99814 870 aa25.57■■□□□ 1.68
RFX1-205ENST00000589239 S1PR5Q9H228 398 aa25.57■■□□□ 1.68
RFX1-205ENST00000589239 UNC80Q8N2C7 3258 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 KRIT1O00522 736 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 TJP3O95049 919 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 FSHRP23945 695 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 RAP1GAP2Q684P5 730 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 NADSYN1Q6IA69 706 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 RFX8Q6ZV50 586 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 SPATA4Q8NEY3 305 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 C1orf74Q96LT6 269 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 RCOR3Q9P2K3 495 aaPredicted RBP25.56■■□□□ 1.68
RFX1-205ENST00000589239 VANGL2Q9ULK5 521 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 ARHGAP26Q9UNA1 814 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 EFR3BQ9Y2G0 817 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 CLUHO75153 1309 aa25.56■■□□□ 1.68
RFX1-205ENST00000589239 GOLGA6L7A0A1B0GV03 622 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 H3BRJ5 948 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 GREM1O60565 184 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 AMPD1P23109 780 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 TPI1P60174 286 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 AUHQ13825 339 aaKnown RBP25.55■■□□□ 1.68
RFX1-205ENST00000589239 SIX1Q15475 284 aaPredicted RBP25.55■■□□□ 1.68
RFX1-205ENST00000589239 GET4Q7L5D6 327 aaPredicted RBP25.55■■□□□ 1.68
RFX1-205ENST00000589239 CEP112Q8N8E3 955 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.55■■□□□ 1.68
RFX1-205ENST00000589239 ARHGEF4Q9NR80 690 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 CFAP97Q9P2B7 532 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 AGO1Q9UL18 857 aaKnown RBP25.55■■□□□ 1.68
RFX1-205ENST00000589239 ACSL4O60488 711 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 SLC11A2P49281 568 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 ITIH3Q06033 890 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 COL19A1Q14993 1142 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 ARTNQ5T4W7 220 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 CES5AQ6NT32 575 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 USP13Q92995 863 aaPredicted RBP25.55■■□□□ 1.68
RFX1-205ENST00000589239 HAUS1Q96CS2 278 aa25.55■■□□□ 1.68
RFX1-205ENST00000589239 PABPC5Q96DU9 382 aaKnown RBP25.55■■□□□ 1.68
RFX1-205ENST00000589239 SOBPA7XYQ1 873 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 ZNF487B1APH4 448 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 E9PAM4 449 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 LEFTY2O00292 366 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 PRAMEF12O95522 483 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 EPHB2P29323 1055 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 CLUL1Q15846 466 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 ATAT1Q5SQI0 421 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 ZNF572Q7Z3I7 529 aaPredicted RBP25.54■■□□□ 1.68
RFX1-205ENST00000589239 MYLIPQ8WY64 445 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 RBM12Q9NTZ6 932 aaKnown RBP25.54■■□□□ 1.68
RFX1-205ENST00000589239 TDP1Q9NUW8 608 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 ETNK2Q9NVF9 386 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 SAE1Q9UBE0 346 aaPredicted RBP25.54■■□□□ 1.68
RFX1-205ENST00000589239 NEU3Q9UQ49 428 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 CTAGE15A4D2H0 777 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 DAPK3O43293 454 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 CTAGE8P0CG41 777 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 OAS2P29728 719 aaKnown RBP25.54■■□□□ 1.68
RFX1-205ENST00000589239 C2orf54Q08AI8 447 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 DPYSQ14117 519 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 FAM133BQ5BKY9 247 aaKnown RBP25.54■■□□□ 1.68
RFX1-205ENST00000589239 MANEALQ5VSG8 457 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 RWDD4Q6NW29 188 aaKnown RBP25.54■■□□□ 1.68
RFX1-205ENST00000589239 BBS12Q6ZW61 710 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 CTAGE6Q86UF2 777 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 CHSY1Q86X52 802 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 ARID3BQ8IVW6 561 aaPredicted RBP25.54■■□□□ 1.68
RFX1-205ENST00000589239 CTAGE4Q8IX94 777 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 NPAS3Q8IXF0 933 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 SH3RF2Q8TEC5 729 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 FGF13Q92913 245 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 PRMT1Q99873 361 aaKnown RBP25.54■■□□□ 1.68
RFX1-205ENST00000589239 FAM118BQ9BPY3 351 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 ZMYM5Q9UJ78 669 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 R3HDM2Q9Y2K5 976 aaKnown RBP25.54■■□□□ 1.68
RFX1-205ENST00000589239 MFHAS1Q9Y4C4 1052 aa25.54■■□□□ 1.68
RFX1-205ENST00000589239 BRWD1Q9NSI6 2320 aa25.53■■□□□ 1.68
RFX1-205ENST00000589239 SLC6A4P31645 630 aa25.53■■□□□ 1.68
RFX1-205ENST00000589239 MTA1Q13330 715 aa25.53■■□□□ 1.68
RFX1-205ENST00000589239 FBXL22Q6P050 247 aa25.53■■□□□ 1.68
RFX1-205ENST00000589239 ZNF683Q8IZ20 524 aa25.53■■□□□ 1.68
RFX1-205ENST00000589239 GPR161Q8N6U8 529 aaKnown RBP25.53■■□□□ 1.68
RFX1-205ENST00000589239 PLD5Q8N7P1 536 aa25.53■■□□□ 1.68
RFX1-205ENST00000589239 RIN3Q8TB24 985 aa25.53■■□□□ 1.68
RFX1-205ENST00000589239 ZSCAN18Q8TBC5 510 aaPredicted RBP25.53■■□□□ 1.68
RFX1-205ENST00000589239 MSLNLQ96KJ4 702 aa25.53■■□□□ 1.68
RFX1-205ENST00000589239 CDX2Q99626 313 aaPredicted RBP25.53■■□□□ 1.68
RFX1-205ENST00000589239 SH3BP1Q9Y3L3 701 aa25.53■■□□□ 1.68
RFX1-205ENST00000589239 SEC31AO94979 1220 aaKnown RBP25.52■■□□□ 1.68
RFX1-205ENST00000589239 HCAR3P49019 387 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 NRG1Q02297 640 aaPredicted RBP25.52■■□□□ 1.68
RFX1-205ENST00000589239 TFDP2Q14188 446 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 SLC9A4Q6AI14 798 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 RFWD3Q6PCD5 774 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 PRELID2Q8N945 189 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 AZIN2Q96A70 460 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 MYEOVQ96EZ4 313 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 APOL1O14791 398 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 ERCC2P18074 760 aa25.52■■□□□ 1.68
RFX1-205ENST00000589239 TACR2P21452 398 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms