RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 SF3A3Q12874 501 aaKnown RBP eCLIP15.72■□□□□ 0.113e-8■■■■■ 54.4
MBD1-217ENST00000588937 C4orf50Q6ZRC1 276 aa15.72■□□□□ 0.11
MBD1-217ENST00000588937 BHLHA9Q7RTU4 235 aa15.72■□□□□ 0.11
MBD1-217ENST00000588937 PRPF39Q86UA1 669 aaKnown RBP15.72■□□□□ 0.11
MBD1-217ENST00000588937 ADAM32Q8TC27 787 aa15.72■□□□□ 0.11
MBD1-217ENST00000588937 RAET1EQ8TD07 263 aa15.72■□□□□ 0.11
MBD1-217ENST00000588937 STAMBPL1Q96FJ0 436 aa15.72■□□□□ 0.11
MBD1-217ENST00000588937 TMEM30AQ9NV96 361 aa15.72■□□□□ 0.11
MBD1-217ENST00000588937 SEPT10Q9P0V9 454 aa15.72■□□□□ 0.11
MBD1-217ENST00000588937 SLC12A4Q9UP95 1085 aa15.72■□□□□ 0.11
MBD1-217ENST00000588937 HTTP42858 3142 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 FAM159BA6NKW6 160 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 I3L4J1 428 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 EOMESO95936 686 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 IBSPP21815 317 aaPredicted RBP15.71■□□□□ 0.11
MBD1-217ENST00000588937 RABGGTBP53611 331 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 CCDC15Q0P6D6 951 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 PAN2Q504Q3 1202 aaKnown RBP15.71■□□□□ 0.11
MBD1-217ENST00000588937 BSPRYQ5W0U4 402 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 CGB2Q6NT52 195 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 CD300LGQ6UXG3 332 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 FAM47EQ6ZV65 393 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 ZNF598Q86UK7 904 aaKnown RBP15.71■□□□□ 0.11
MBD1-217ENST00000588937 ZNF75CPQ92670 426 aaPredicted RBP15.71■□□□□ 0.11
MBD1-217ENST00000588937 PKMYT1Q99640 499 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 IQCGQ9H095 443 aaKnown RBP15.71■□□□□ 0.11
MBD1-217ENST00000588937 RXFP1Q9HBX9 757 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 RGS18Q9NS28 235 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 TRMT13Q9NUP7 481 aaKnown RBP15.71■□□□□ 0.11
MBD1-217ENST00000588937 ABCF3Q9NUQ8 709 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 TMEM51Q9NW97 253 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 GRID1Q9ULK0 1009 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 PCDHB8Q9UN66 801 aa15.71■□□□□ 0.11
MBD1-217ENST00000588937 MOXD2PA6NHM9 499 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 TRIM49D1C9J1S8 452 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 GOLGA8RI6L899 631 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 NEK3P51956 506 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 ACLYP53396 1101 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 PPIDQ08752 370 aaKnown RBP15.7■□□□□ 0.1
MBD1-217ENST00000588937 WASHC5Q12768 1159 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 NAB1Q13506 487 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 FYB2Q5VWT5 728 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 STEAP4Q687X5 459 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 GLB1LQ6UWU2 654 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 PID1Q7Z2X4 250 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 ZNF567Q8N184 647 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 PDCD7Q8N8D1 485 aaKnown RBP15.7■□□□□ 0.1
MBD1-217ENST00000588937 CCDC63Q8NA47 563 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 CDKL2Q92772 493 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 TTC17Q96AE7 1141 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 SERAC1Q96JX3 654 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 GLT1D1Q96MS3 346 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 TKTL2Q9H0I9 626 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 KLHL8Q9P2G9 620 aaPredicted RBP15.7■□□□□ 0.1
MBD1-217ENST00000588937 COL4A4P53420 1690 aaPredicted RBP15.7■□□□□ 0.1
MBD1-217ENST00000588937 FRMPD3Q5JV73 1810 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 FAM72CH0Y354 149 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 COPEO14579 308 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 PYGBP11216 843 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 ADRA1DP25100 572 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 ALDH3A1P30838 453 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 YWHAHQ04917 246 aaPredicted RBP15.7■□□□□ 0.1
MBD1-217ENST00000588937 SLC20A2Q08357 652 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 SPRED3Q2MJR0 410 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 FAM72AQ5TYM5 149 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 FAM72DQ6L9T8 149 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 SH2D5Q6ZV89 423 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 PACS2Q86VP3 889 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 CHSY1Q86X52 802 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 FAM72BQ86X60 149 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 SPATA2LQ8IUW3 424 aaPredicted RBP15.7■□□□□ 0.1
MBD1-217ENST00000588937 MPP5Q8N3R9 675 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 URGCPQ8TCY9 931 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 HASPINQ8TF76 798 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 DEPDC1BQ8WUY9 529 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 EDEM1Q92611 657 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 RNF34Q969K3 372 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 HDAC11Q96DB2 347 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 VAT1Q99536 393 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 KLF6Q99612 283 aaPredicted RBP15.7■□□□□ 0.1
MBD1-217ENST00000588937 RHOBTB2Q9BYZ6 727 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 OSBPL2Q9H1P3 480 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 PLAC1Q9HBJ0 212 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 MKS1Q9NXB0 559 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 OR12D3Q9UGF7 316 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 TRHDEQ9UKU6 1024 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 USH1CQ9Y6N9 552 aa15.7■□□□□ 0.1
MBD1-217ENST00000588937 CENPFP49454 3210 aa15.69■□□□□ 0.1
MBD1-217ENST00000588937 ZNF638Q14966 1978 aaKnown RBP15.69■□□□□ 0.1
MBD1-217ENST00000588937 CFAP73A6NFT4 308 aa15.69■□□□□ 0.1
MBD1-217ENST00000588937 ERI2A8K979 691 aaKnown RBP15.69■□□□□ 0.1
MBD1-217ENST00000588937 CXorf49A8MYA2 514 aaPredicted RBP15.69■□□□□ 0.1
MBD1-217ENST00000588937 ALDH1A2O94788 518 aa15.69■□□□□ 0.1
MBD1-217ENST00000588937 PGAM1P18669 254 aa15.69■□□□□ 0.1
MBD1-217ENST00000588937 PSMB4P28070 264 aa15.69■□□□□ 0.1
MBD1-217ENST00000588937 HTR7P34969 479 aa15.69■□□□□ 0.1
MBD1-217ENST00000588937 COG7P83436 770 aa15.69■□□□□ 0.1
MBD1-217ENST00000588937 SETDB1Q15047 1291 aa15.69■□□□□ 0.1
MBD1-217ENST00000588937 GALNTL6Q49A17 601 aa15.69■□□□□ 0.1
MBD1-217ENST00000588937 FAM182AQ5T1J6 154 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms