RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 FIGNQ5HY92 759 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 FAM102AQ5T9C2 384 aaPredicted RBP16.04■□□□□ 0.16
GCDH-208ENST00000588905 RNF43Q68DV7 783 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 MMS22LQ6ZRQ5 1243 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 PHLDB2Q86SQ0 1253 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 MSANTD4Q8NCY6 345 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 OLIG1Q8TAK6 271 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 HMGB4Q8WW32 186 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 GABRG3Q99928 467 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 SYT11Q9BT88 431 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 ADAM33Q9BZ11 813 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 FAM204AQ9H8W3 233 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.16
GCDH-208ENST00000588905 DDIT4Q9NX09 232 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 CACNA2D2Q9NY47 1150 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.04■□□□□ 0.16
GCDH-208ENST00000588905 AIPL1Q9NZN9 384 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 CALCOCO1Q9P1Z2 691 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 THAP10Q9P2Z0 257 aaPredicted RBP16.04■□□□□ 0.16
GCDH-208ENST00000588905 SLC12A6Q9UHW9 1150 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 XPO7Q9UIA9 1087 aaKnown RBP16.04■□□□□ 0.16
GCDH-208ENST00000588905 TMEM59LQ9UK28 342 aa16.04■□□□□ 0.16
GCDH-208ENST00000588905 MAP1BP46821 2468 aaKnown RBP16.04■□□□□ 0.16
GCDH-208ENST00000588905 CACNA1BQ00975 2339 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 KCNU1A8MYU2 1149 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 RHOBTB1O94844 696 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 MOCS2O96007 188 aaPredicted RBP16.03■□□□□ 0.16
GCDH-208ENST00000588905 SLC2A3P11169 496 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 TFE3P19532 575 aaPredicted RBP16.03■□□□□ 0.16
GCDH-208ENST00000588905 SGSHP51688 502 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 BYSLQ13895 437 aaKnown RBP16.03■□□□□ 0.16
GCDH-208ENST00000588905 ELF2Q15723 593 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 OTUD1Q5VV17 481 aaPredicted RBP16.03■□□□□ 0.16
GCDH-208ENST00000588905 E4F1Q66K89 784 aaPredicted RBP16.03■□□□□ 0.16
GCDH-208ENST00000588905 TRNP1Q6NT89 227 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 PGBD3Q8N328 593 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 ATP6V0D2Q8N8Y2 350 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 ZNF557Q8N988 423 aaPredicted RBP16.03■□□□□ 0.16
GCDH-208ENST00000588905 HJURPQ8NCD3 748 aaPredicted RBP16.03■□□□□ 0.16
GCDH-208ENST00000588905 RNF214Q8ND24 703 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 WFIKKN2Q8TEU8 576 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 NT5C3BQ969T7 300 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 MYEOVQ96EZ4 313 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 NPY6RQ99463 290 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 C11orf70Q9BRQ4 267 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 NUP58Q9BVL2 599 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 CIPCQ9C0C6 399 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 DUSP15Q9H1R2 295 aaPredicted RBP16.03■□□□□ 0.16
GCDH-208ENST00000588905 USP18Q9UMW8 372 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 INVSQ9Y283 1065 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 STON1Q9Y6Q2 735 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 LAMA1P25391 3075 aa16.03■□□□□ 0.16
GCDH-208ENST00000588905 CHD8Q9HCK8 2581 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 SYNJ2BP-COX16A0A087WUM0 186 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 TYW5A2RUC4 315 aaKnown RBP16.02■□□□□ 0.16
GCDH-208ENST00000588905 WASH3PC4AMC7 463 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 M0QYT0 321 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 EPN2O95208 641 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 HLA-FP30511 346 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 FLT3P36888 993 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 P2RY2P41231 377 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 CENPCQ03188 943 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 LMNB2Q03252 620 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 NME3Q13232 169 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 ASIC2Q16515 512 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 MS4A13Q5J8X5 152 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 SFMBT2Q5VUG0 894 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 TMEM215Q68D42 235 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 KIAA0907Q7Z7F0 614 aaPredicted RBP16.02■□□□□ 0.16
GCDH-208ENST00000588905 PHF13Q86YI8 300 aaPredicted RBP16.02■□□□□ 0.16
GCDH-208ENST00000588905 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.02■□□□□ 0.16
GCDH-208ENST00000588905 RNF34Q969K3 372 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 BTN2A3PQ96KV6 586 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 XPO4Q9C0E2 1151 aaKnown RBP16.02■□□□□ 0.16
GCDH-208ENST00000588905 NUCKS1Q9H1E3 243 aaKnown RBP16.02■□□□□ 0.16
GCDH-208ENST00000588905 CD248Q9HCU0 757 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 ABCB8Q9NUT2 735 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 SEPT11Q9NVA2 429 aaKnown RBP16.02■□□□□ 0.16
GCDH-208ENST00000588905 RRN3Q9NYV6 651 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 ADAM22Q9P0K1 906 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 COX16Q9P0S2 106 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 STIM2Q9P246 746 aa16.02■□□□□ 0.16
GCDH-208ENST00000588905 TNRC6BQ9UPQ9 1833 aaKnown RBP16.02■□□□□ 0.16
GCDH-208ENST00000588905 ABCA7Q8IZY2 2146 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 GON4LQ3T8J9 2241 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 PABPC1P11940 636 aaKnown RBP16.01■□□□□ 0.15
GCDH-208ENST00000588905 GABRG2P18507 467 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 ABCB4P21439 1286 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 TACR2P21452 398 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 TNFAIP3P21580 790 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 CCR1P32246 355 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 PRKCIP41743 596 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 IL12RB1P42701 662 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 NSFP46459 744 aaKnown RBP16.01■□□□□ 0.15
GCDH-208ENST00000588905 RPS24P62847 133 aaKnown RBP16.01■□□□□ 0.15
GCDH-208ENST00000588905 MTA1Q13330 715 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 ENPP2Q13822 863 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 ZNF234Q14588 700 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 STARD3Q14849 445 aa16.01■□□□□ 0.15
GCDH-208ENST00000588905 SLC25A52Q3SY17 297 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms