RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 CCR1P32246 355 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 HOXD12P35452 270 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 SCNN1AP37088 669 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 SLC6A3Q01959 620 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 RPL6Q02878 288 aaKnown RBP14.97□□□□□ -0.01
DDX39A-208ENST00000588692 ZC3H12AQ5D1E8 599 aaKnown RBP14.97□□□□□ -0.01
DDX39A-208ENST00000588692 MBLAC2Q68D91 279 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 OR6B2Q6IFH4 312 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 KIAA1324Q6UXG2 1013 aaKnown RBP14.97□□□□□ -0.01
DDX39A-208ENST00000588692 TMEFF1Q8IYR6 380 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 MSANTD4Q8NCY6 345 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 FIBINQ8TAL6 211 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 SORCS1Q8WY21 1168 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 DDX1Q92499 740 aaKnown RBP14.97□□□□□ -0.01
DDX39A-208ENST00000588692 NUCKS1Q9H1E3 243 aaKnown RBP14.97□□□□□ -0.01
DDX39A-208ENST00000588692 GANQ9H2C0 597 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 SMOC1Q9H4F8 434 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 FBRSQ9HAH7 460 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 DDIT4Q9NX09 232 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 RRN3Q9NYV6 651 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 CYP8B1Q9UNU6 501 aa14.97□□□□□ -0.01
DDX39A-208ENST00000588692 KCNU1A8MYU2 1149 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 KHNYNO15037 678 aaKnown RBP14.96□□□□□ -0.01
DDX39A-208ENST00000588692 DLDP09622 509 aaKnown RBP14.96□□□□□ -0.01
DDX39A-208ENST00000588692 POLR2EP19388 210 aaKnown RBP14.96□□□□□ -0.01
DDX39A-208ENST00000588692 ABCB4P21439 1286 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 CD70P32970 193 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 NOS2P35228 1153 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 PTGER3P43115 390 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 RPS24P62847 133 aaKnown RBP14.96□□□□□ -0.01
DDX39A-208ENST00000588692 CDH18Q13634 790 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 FNDC3BQ53EP0 1204 aaKnown RBP14.96□□□□□ -0.01
DDX39A-208ENST00000588692 TTC39BQ5VTQ0 682 aaPredicted RBP14.96□□□□□ -0.01
DDX39A-208ENST00000588692 PEAR1Q5VY43 1037 aaPredicted RBP14.96□□□□□ -0.01
DDX39A-208ENST00000588692 IL31Q6EBC2 164 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 TCEAL6Q6IPX3 200 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 CHSY1Q86X52 802 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 ZNF677Q86XU0 584 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 SYT12Q8IV01 421 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 WFDC5Q8TCV5 224 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 PIGKQ92643 395 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 TCEAL3Q969E4 200 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 EDEM2Q9BV94 578 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 MKRN2Q9H000 416 aaKnown RBP14.96□□□□□ -0.01
DDX39A-208ENST00000588692 TMEM245Q9H330 911 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 TMEM51Q9NW97 253 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 STIM2Q9P246 746 aa14.96□□□□□ -0.01
DDX39A-208ENST00000588692 USP36Q9P275 1121 aaKnown RBP14.96□□□□□ -0.01
DDX39A-208ENST00000588692 EVLQ9UI08 416 aaPredicted RBP14.96□□□□□ -0.01
DDX39A-208ENST00000588692 F5H5T6 163 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 GRAP2O75791 330 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 LUC7L3O95232 432 aaKnown RBP14.95□□□□□ -0.02
DDX39A-208ENST00000588692 ASLP04424 464 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 TACR2P21452 398 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 MATKP42679 507 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 GABRB2P47870 512 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 PITX1P78337 314 aaPredicted RBP14.95□□□□□ -0.02
DDX39A-208ENST00000588692 CAMK2GQ13555 558 aaPredicted RBP14.95□□□□□ -0.02
DDX39A-208ENST00000588692 PTPRNQ16849 979 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 STPG1Q5TH74 334 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 RAP1GAP2Q684P5 730 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 ARMCX6Q7L4S7 300 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 RABEPKQ7Z6M1 372 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 TMPRSS6Q8IU80 811 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 LGI2Q8N0V4 545 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 EPS8L1Q8TE68 723 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 PRCCQ92733 491 aaPredicted RBP14.95□□□□□ -0.02
DDX39A-208ENST00000588692 ERLEC1Q96DZ1 483 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 LMLNQ96KR4 655 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 SLC6A17Q9H1V8 727 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 RXFP3Q9NSD7 469 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 LIMA1Q9UHB6 759 aaKnown RBP14.95□□□□□ -0.02
DDX39A-208ENST00000588692 XPO7Q9UIA9 1087 aaKnown RBP14.95□□□□□ -0.02
DDX39A-208ENST00000588692 STAP1Q9ULZ2 295 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 LAMA1P25391 3075 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 LNP1A1A4G5 178 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 LGALS16A8MUM7 142 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 NDUFS2O75306 463 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 MOCS3O95396 460 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 C7P10643 843 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 CD6P30203 668 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 COPB1P53618 953 aaKnown RBP14.95□□□□□ -0.02
DDX39A-208ENST00000588692 COPAP53621 1224 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 ZNF33AQ06730 810 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 LMAN2Q12907 356 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 RABGAP1LQ5R372 815 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 NOP9Q86U38 636 aaKnown RBP14.95□□□□□ -0.02
DDX39A-208ENST00000588692 ERICH1Q86X53 443 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 CARNMT1Q8N4J0 409 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 KDM1BQ8NB78 822 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 OR2T3Q8NH03 318 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 CYB5D2Q8WUJ1 264 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 RNF34Q969K3 372 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 TTC17Q96AE7 1141 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 C18orf8Q96DM3 657 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 MYEOVQ96EZ4 313 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 SIPA1Q96FS4 1042 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 PRMT1Q99873 361 aaKnown RBP14.95□□□□□ -0.02
DDX39A-208ENST00000588692 NAT10Q9H0A0 1025 aaKnown RBP14.95□□□□□ -0.02
DDX39A-208ENST00000588692 ITM2CQ9NQX7 267 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms