RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 STX10O60499 249 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 IGHV4-34P06331 123 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 SETSIPP0DME0 302 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 SLC6A4P31645 630 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 PMS1P54277 932 aaKnown RBP19.18■□□□□ 0.66
CCDC43-204ENST00000588687 ARID5AQ03989 594 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 COL28A1Q2UY09 1125 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 MPP7Q5T2T1 576 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 PIK3R6Q5UE93 754 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 MBLAC2Q68D91 279 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 RFWD3Q6PCD5 774 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 PDZD3Q86UT5 571 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 UBA3Q8TBC4 463 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 TFAP2BQ92481 460 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 IGSF8Q969P0 613 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 TMA16Q96EY4 203 aaKnown RBP19.18■□□□□ 0.66
CCDC43-204ENST00000588687 MYEOVQ96EZ4 313 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 IPO9Q96P70 1041 aaKnown RBP19.18■□□□□ 0.66
CCDC43-204ENST00000588687 CDC6Q99741 560 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 ABCC13Q9NSE7 274 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 RAXQ9Y2V3 346 aa19.18■□□□□ 0.66
CCDC43-204ENST00000588687 CETN3O15182 167 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 PAPSS1O43252 624 aaPredicted RBP19.17■□□□□ 0.66
CCDC43-204ENST00000588687 PCDHGA12O60330 932 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 CD27P26842 260 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 CTSKP43235 329 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 COBLL1Q53SF7 1204 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 DCAF17Q5H9S7 520 aaPredicted RBP19.17■□□□□ 0.66
CCDC43-204ENST00000588687 NADSYN1Q6IA69 706 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 RHBDD1Q8TEB9 315 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 RNF139Q8WU17 664 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 SLC35F5Q8WV83 523 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 SLC35C1Q96A29 364 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 BTBD1Q9H0C5 482 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 RSPH9Q9H1X1 276 aaPredicted RBP19.17■□□□□ 0.66
CCDC43-204ENST00000588687 MTG2Q9H4K7 406 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 HESX1Q9UBX0 185 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 SERGEFQ9UGK8 458 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 INTS6Q9UL03 887 aaKnown RBP19.17■□□□□ 0.66
CCDC43-204ENST00000588687 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.17■□□□□ 0.66
CCDC43-204ENST00000588687 PLA2G4CQ9UP65 541 aa19.17■□□□□ 0.66
CCDC43-204ENST00000588687 GOLGA6L7A0A1B0GV03 622 aa19.16■□□□□ 0.66
CCDC43-204ENST00000588687 H0Y8X5 98 aa19.16■□□□□ 0.66
CCDC43-204ENST00000588687 ZNF202O95125 648 aa19.16■□□□□ 0.66
CCDC43-204ENST00000588687 VDRP11473 427 aa19.16■□□□□ 0.66
CCDC43-204ENST00000588687 CD19P15391 556 aa19.16■□□□□ 0.66
CCDC43-204ENST00000588687 PRCPP42785 496 aa19.16■□□□□ 0.66
CCDC43-204ENST00000588687 SOWAHCQ53LP3 525 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-204ENST00000588687 PMF1Q6P1K2 205 aa19.16■□□□□ 0.66
CCDC43-204ENST00000588687 LCLAT1Q6UWP7 414 aa19.16■□□□□ 0.66
CCDC43-204ENST00000588687 SIX6OS1Q8N1H7 587 aa19.16■□□□□ 0.66
CCDC43-204ENST00000588687 CLEC4CQ8WTT0 213 aa19.16■□□□□ 0.66
CCDC43-204ENST00000588687 MRGPRX3Q96LB0 322 aa19.16■□□□□ 0.66
CCDC43-204ENST00000588687 IRX2Q9BZI1 471 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-204ENST00000588687 URB1O60287 2271 aaKnown RBP19.15■□□□□ 0.66
CCDC43-204ENST00000588687 KCNK3O14649 394 aa19.15■□□□□ 0.66
CCDC43-204ENST00000588687 GRK6P43250 576 aa19.15■□□□□ 0.66
CCDC43-204ENST00000588687 CCT8P50990 548 aa19.15■□□□□ 0.66
CCDC43-204ENST00000588687 SMAD1Q15797 465 aaKnown RBP19.15■□□□□ 0.66
CCDC43-204ENST00000588687 ZNF776Q68DI1 518 aaPredicted RBP19.15■□□□□ 0.66
CCDC43-204ENST00000588687 IRGQQ8WZA9 623 aa19.15■□□□□ 0.66
CCDC43-204ENST00000588687 TTC17Q96AE7 1141 aa19.15■□□□□ 0.66
CCDC43-204ENST00000588687 PABPC3Q9H361 631 aaKnown RBP19.15■□□□□ 0.66
CCDC43-204ENST00000588687 EBF2Q9HAK2 575 aa19.15■□□□□ 0.66
CCDC43-204ENST00000588687 SGK2Q9HBY8 427 aa19.15■□□□□ 0.66
CCDC43-204ENST00000588687 SCUBE2Q9NQ36 999 aa19.15■□□□□ 0.66
CCDC43-204ENST00000588687 IRAK2O43187 625 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 TNFSF14O43557 240 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 TBL1XO60907 577 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 FSBPO95073 299 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 DNTTP04053 509 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 FYNP06241 537 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 ATP5BP06576 529 aaKnown RBP19.14■□□□□ 0.65
CCDC43-204ENST00000588687 LCP1P13796 627 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 RGS7P49802 495 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 PNOCQ13519 176 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 ARID5BQ14865 1188 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 TEAD4Q15561 434 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 HNRNPA1L2Q32P51 320 aaKnown RBP19.14■□□□□ 0.65
CCDC43-204ENST00000588687 TTC31Q49AM3 519 aaPredicted RBP19.14■□□□□ 0.65
CCDC43-204ENST00000588687 TCERG1LQ5VWI1 586 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 USP30Q70CQ3 517 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 GOLGA1Q92805 767 aa19.14■□□□□ 0.65
CCDC43-204ENST00000588687 HELZ2Q9BYK8 2649 aaKnown RBP19.13■□□□□ 0.65
CCDC43-204ENST00000588687 RNF225M0QZC1 329 aaPredicted RBP19.13■□□□□ 0.65
CCDC43-204ENST00000588687 ACSL4O60488 711 aa19.13■□□□□ 0.65
CCDC43-204ENST00000588687 SIN3BO75182 1162 aa19.13■□□□□ 0.65
CCDC43-204ENST00000588687 PAEPP09466 180 aa19.13■□□□□ 0.65
CCDC43-204ENST00000588687 YWHAEP62258 255 aaKnown RBP19.13■□□□□ 0.65
CCDC43-204ENST00000588687 NUGGCQ68CJ6 796 aa19.13■□□□□ 0.65
CCDC43-204ENST00000588687 KIAA0895LQ68EN5 471 aa19.13■□□□□ 0.65
CCDC43-204ENST00000588687 ANKRD40Q6AI12 368 aa19.13■□□□□ 0.65
CCDC43-204ENST00000588687 MFN1Q8IWA4 741 aa19.13■□□□□ 0.65
CCDC43-204ENST00000588687 FIBINQ8TAL6 211 aa19.13■□□□□ 0.65
CCDC43-204ENST00000588687 KAT5Q92993 513 aa19.13■□□□□ 0.65
CCDC43-204ENST00000588687 AZIN2Q96A70 460 aa19.13■□□□□ 0.65
CCDC43-204ENST00000588687 FCRL2Q96LA5 508 aaPredicted RBP19.13■□□□□ 0.65
CCDC43-204ENST00000588687 SLC6A18Q96N87 628 aa19.13■□□□□ 0.65
CCDC43-204ENST00000588687 BBC3Q96PG8 261 aaPredicted RBP19.13■□□□□ 0.65
CCDC43-204ENST00000588687 KIAA1257Q9ULG3 409 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms