RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 PRMT1Q99873 361 aaKnown RBP11.68□□□□□ -0.54
VMP1-207ENST00000588131 EPC1Q9H2F5 836 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 TASP1Q9H6P5 420 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 LMCD1Q9NZU5 365 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 SLC12A6Q9UHW9 1150 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 RANBP2P49792 3224 aaKnown RBP11.68□□□□□ -0.54
VMP1-207ENST00000588131 LAMA2P24043 3122 aaKnown RBP11.67□□□□□ -0.54
VMP1-207ENST00000588131 APOC4-APOC2K7ER74 178 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 SCAMP3O14828 347 aaKnown RBP11.67□□□□□ -0.54
VMP1-207ENST00000588131 DCLK1O15075 740 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 DAPK3O43293 454 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 ACSL4O60488 711 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 APOC2P02655 101 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 PFKLP17858 780 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 ERCC2P18074 760 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 TACR2P21452 398 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 TGM2P21980 687 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 DDX6P26196 483 aaKnown RBP eCLIP11.67□□□□□ -0.54
VMP1-207ENST00000588131 EPHB2P29323 1055 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 HOXC13P31276 330 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 SLC6A4P31645 630 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 COILP38432 576 aaPredicted RBP11.67□□□□□ -0.54
VMP1-207ENST00000588131 KCNJ1P48048 391 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 HCAR3P49019 387 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 HARS2P49590 506 aaKnown RBP11.67□□□□□ -0.54
VMP1-207ENST00000588131 NRG1Q02297 640 aaPredicted RBP11.67□□□□□ -0.54
VMP1-207ENST00000588131 GBE1Q04446 702 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 DLX2Q07687 328 aaPredicted RBP11.67□□□□□ -0.54
VMP1-207ENST00000588131 FAM133BQ5BKY9 247 aaKnown RBP11.67□□□□□ -0.54
VMP1-207ENST00000588131 GPR149Q86SP6 731 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 CHSY1Q86X52 802 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 NETO2Q8NC67 525 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 ACTL9Q8TC94 416 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 IGSF8Q969P0 613 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 TBC1D31Q96DN5 1066 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 LRCH3Q96II8 777 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 C1orf74Q96LT6 269 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 ZSWIM3Q96MP5 696 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 FAM161BQ96MY7 647 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 LRRC1Q9BTT6 524 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 LRRC19Q9H756 370 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 CLEC1BQ9P126 229 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 AGO1Q9UL18 857 aaKnown RBP11.67□□□□□ -0.54
VMP1-207ENST00000588131 DNPEPQ9ULA0 475 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 VANGL2Q9ULK5 521 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 CCL26Q9Y258 94 aa11.67□□□□□ -0.54
VMP1-207ENST00000588131 MRPS23Q9Y3D9 190 aaKnown RBP11.67□□□□□ -0.54
VMP1-207ENST00000588131 LEFTY2O00292 366 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 ZNF197O14709 1029 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 RAD51CO43502 376 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 LIASO43766 372 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 MFSD11O43934 449 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 TBX10O75333 385 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 MAP3K6O95382 1288 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 PRAMEF12O95522 483 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 CHRNA3P32297 505 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 PTGIRP43119 386 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 SLC11A2P49281 568 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 ZNF135P52742 658 aaPredicted RBP11.66□□□□□ -0.54
VMP1-207ENST00000588131 SLC10A2Q12908 348 aaPredicted RBP11.66□□□□□ -0.54
VMP1-207ENST00000588131 PAFAH1B3Q15102 231 aaKnown RBP11.66□□□□□ -0.54
VMP1-207ENST00000588131 NOMO1Q15155 1222 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 CCNG2Q16589 344 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 ERCC6LQ2NKX8 1250 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 RWDD4Q6NW29 188 aaKnown RBP11.66□□□□□ -0.54
VMP1-207ENST00000588131 FBXL22Q6P050 247 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 CCDC137Q6PK04 289 aaKnown RBP11.66□□□□□ -0.54
VMP1-207ENST00000588131 Q6ZNB5 142 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 B4GALNT4Q76KP1 1039 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 TP53INP2Q8IXH6 220 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 CMTM8Q8IZV2 173 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 CCDC33Q8N5R6 958 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 NPWQ8N729 165 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 TTC16Q8NEE8 873 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 RIN3Q8TB24 985 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 SLC35B2Q8TB61 432 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 AZIN2Q96A70 460 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 SLITRK6Q9H5Y7 841 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 C10orf88Q9H8K7 445 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 MPP6Q9NZW5 540 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 CFAP97Q9P2B7 532 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 AMACRQ9UHK6 382 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 ARHGAP26Q9UNA1 814 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 HEY1Q9Y5J3 304 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 LAMA3Q16787 3333 aa11.66□□□□□ -0.54
VMP1-207ENST00000588131 CLUHO75153 1309 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 IGLV3-10A0A075B6K4 115 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 DRGXA6NNA5 263 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 SOBPA7XYQ1 873 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 TRDMT1O14717 391 aaKnown RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 TTI1O43156 1089 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 CTIFO43310 598 aaKnown RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 CNTN5O94779 1100 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 RHOXF2BP0C7M4 288 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 ZFXP17010 805 aaPredicted RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 POU3F3P20264 500 aaPredicted RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 IGFBP4P22692 258 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 FSHRP23945 695 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 HTR7P34969 479 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 AVPR1AP37288 418 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms