RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 AZIN2Q96A70 460 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 SLC39A13Q96H72 371 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 CAMK1GQ96NX5 476 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 SERPINB11Q96P15 392 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 SLC4A5Q9BY07 1137 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 LHX5Q9H2C1 402 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 PRSS16Q9NQE7 514 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 TJP2Q9UDY2 1190 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 SUSD2Q9UGT4 822 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 RWDD2AQ9UIY3 292 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 MAP1BP46821 2468 aaKnown RBP14.88□□□□□ -0.03
VMP1-206ENST00000587945 A0A1B0GTW7 788 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 METTL12A8MUP2 240 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 BECN2A8MW95 431 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 UPK3BL1B0FP48 263 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 C1QTNF9BB2RNN3 333 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 UPK3BL2E5RIL1 263 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 CAPN9O14815 690 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 IRAK2O43187 625 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 SART1O43290 800 aaKnown RBP14.88□□□□□ -0.03
VMP1-206ENST00000587945 ATP5BP06576 529 aaKnown RBP14.88□□□□□ -0.03
VMP1-206ENST00000587945 C1QTNF9P0C862 333 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 GNA15P30679 374 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 ACSL1P33121 698 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 USP8P40818 1118 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 RPS14P62263 151 aaKnown RBP14.88□□□□□ -0.03
VMP1-206ENST00000587945 PITX1P78337 314 aaPredicted RBP14.88□□□□□ -0.03
VMP1-206ENST00000587945 TAF5Q15542 800 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 DCAF6Q58WW2 860 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 ZC3H12AQ5D1E8 599 aaKnown RBP14.88□□□□□ -0.03
VMP1-206ENST00000587945 FSCBQ5H9T9 825 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 MS4A13Q5J8X5 152 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 IRF2BP1Q8IU81 584 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 CARNMT1Q8N4J0 409 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 HJURPQ8NCD3 748 aaPredicted RBP14.88□□□□□ -0.03
VMP1-206ENST00000587945 FIBINQ8TAL6 211 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 SCNM1Q9BWG6 230 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 C6orf106Q9H6K1 298 aaPredicted RBP14.88□□□□□ -0.03
VMP1-206ENST00000587945 DNAAF2Q9NVR5 837 aaKnown RBP14.88□□□□□ -0.03
VMP1-206ENST00000587945 EIF2B4Q9UI10 523 aaKnown RBP14.88□□□□□ -0.03
VMP1-206ENST00000587945 INTS6Q9UL03 887 aaKnown RBP14.88□□□□□ -0.03
VMP1-206ENST00000587945 TLR6Q9Y2C9 796 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 SLCO1B1Q9Y6L6 691 aa14.88□□□□□ -0.03
VMP1-206ENST00000587945 ASCC3Q8N3C0 2202 aaKnown RBP14.87□□□□□ -0.03
VMP1-206ENST00000587945 MED7O43513 233 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 HYAL3O43820 417 aaPredicted RBP14.87□□□□□ -0.03
VMP1-206ENST00000587945 SH3BP5O60239 455 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 GJB3O75712 270 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 CSKP41240 450 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 UBE2HP62256 183 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 NNTQ13423 1086 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 TRIM65Q6PJ69 517 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 ENOSF1Q7L5Y1 443 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 TMEM110Q86TL2 294 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 PASD1Q8IV76 773 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 LGI2Q8N0V4 545 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 STK32AQ8WU08 396 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 SNX19Q92543 992 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 TTC17Q96AE7 1141 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 MYO19Q96H55 970 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 DDX50Q9BQ39 737 aaKnown RBP14.87□□□□□ -0.03
VMP1-206ENST00000587945 IL21RQ9HBE5 538 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 AJAP1Q9UKB5 411 aaPredicted RBP14.87□□□□□ -0.03
VMP1-206ENST00000587945 PLXND1Q9Y4D7 1925 aa14.87□□□□□ -0.03
VMP1-206ENST00000587945 TNRC6BQ9UPQ9 1833 aaKnown RBP14.87□□□□□ -0.03
VMP1-206ENST00000587945 ZFHX4Q86UP3 3567 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 CACNA1EQ15878 2313 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 BCAT2O15382 392 aaPredicted RBP14.86□□□□□ -0.03
VMP1-206ENST00000587945 TRUB2O95900 331 aaKnown RBP14.86□□□□□ -0.03
VMP1-206ENST00000587945 PROS1P07225 676 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 CTSOP43234 321 aaPredicted RBP14.86□□□□□ -0.03
VMP1-206ENST00000587945 NUMBP49757 651 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 BNC1Q01954 994 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 PDCLQ13371 301 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 CDH18Q13634 790 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 EXOC3L4Q17RC7 722 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 RAP1GAP2Q684P5 730 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 UNQ6494/PRO21346Q6UXR6 183 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 GBP6Q6ZN66 633 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 CHSY1Q86X52 802 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 WDTC1Q8N5D0 677 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 MRGPRX3Q96LB0 322 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 ADAM33Q9BZ11 813 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 IRX2Q9BZI1 471 aaPredicted RBP14.86□□□□□ -0.03
VMP1-206ENST00000587945 THAP9Q9H5L6 903 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 POPDC2Q9HBU9 364 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 APEX2Q9UBZ4 518 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 SUN2Q9UH99 717 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 NFE2L3Q9Y4A8 694 aa14.86□□□□□ -0.03
VMP1-206ENST00000587945 CEP295Q9C0D2 2601 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 SYNJ2BP-COX16A0A087WUM0 186 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 TYW5A2RUC4 315 aaKnown RBP14.85□□□□□ -0.03
VMP1-206ENST00000587945 SIN3BO75182 1162 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 LUC7L3O95232 432 aaKnown RBP14.85□□□□□ -0.03
VMP1-206ENST00000587945 IGLV3-25P01717 112 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 APOEP02649 317 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 DNTTP04053 509 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 TACR2P21452 398 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 PON1P27169 355 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 MTIF2P46199 727 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms