RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 TPM1P09493 284 aa19.43■□□□□ 0.7
ATG4D-203ENST00000585752 FERP16591 822 aa19.43■□□□□ 0.7
ATG4D-203ENST00000585752 GPD2P43304 727 aa19.43■□□□□ 0.7
ATG4D-203ENST00000585752 FNDC3BQ53EP0 1204 aaKnown RBP19.43■□□□□ 0.7
ATG4D-203ENST00000585752 SYCP2LQ5T4T6 812 aa19.43■□□□□ 0.7
ATG4D-203ENST00000585752 RGL4Q8IZJ4 473 aa19.43■□□□□ 0.7
ATG4D-203ENST00000585752 CEP76Q8TAP6 659 aa19.43■□□□□ 0.7
ATG4D-203ENST00000585752 PIWIL1Q96J94 861 aaKnown RBP19.43■□□□□ 0.7
ATG4D-203ENST00000585752 IRX2Q9BZI1 471 aaPredicted RBP19.43■□□□□ 0.7
ATG4D-203ENST00000585752 LHX5Q9H2C1 402 aa19.43■□□□□ 0.7
ATG4D-203ENST00000585752 SEPT11Q9NVA2 429 aaKnown RBP19.43■□□□□ 0.7
ATG4D-203ENST00000585752 HCN2Q9UL51 889 aa19.43■□□□□ 0.7
ATG4D-203ENST00000585752 MYO6Q9UM54 1294 aa19.43■□□□□ 0.7
ATG4D-203ENST00000585752 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.43■□□□□ 0.7
ATG4D-203ENST00000585752 ADAMTS9Q9P2N4 1935 aa19.43■□□□□ 0.7
ATG4D-203ENST00000585752 C4orf47A7E2U8 309 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 ACSL4O60488 711 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 APOEP02649 317 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 ATP5BP06576 529 aaKnown RBP19.42■□□□□ 0.7
ATG4D-203ENST00000585752 IL12RB1P42701 662 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 PTGER3P43115 390 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 RING1Q06587 406 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 ZNF33AQ06730 810 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 PDCLQ13371 301 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 ZNF234Q14588 700 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 DUOXA1Q1HG43 343 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 UAP1L1Q3KQV9 507 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 CHST9Q7L1S5 443 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 NOP9Q86U38 636 aaKnown RBP19.42■□□□□ 0.7
ATG4D-203ENST00000585752 AHI1Q8N157 1196 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 C1orf131Q8NDD1 294 aaKnown RBP19.42■□□□□ 0.7
ATG4D-203ENST00000585752 EPS8L1Q8TE68 723 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 STK32AQ8WU08 396 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 PRCCQ92733 491 aaPredicted RBP19.42■□□□□ 0.7
ATG4D-203ENST00000585752 MRGPRX1Q96LB2 322 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 EDEM3Q9BZQ6 932 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 STIM2Q9P246 746 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 SLC12A6Q9UHW9 1150 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 STOML2Q9UJZ1 356 aa19.42■□□□□ 0.7
ATG4D-203ENST00000585752 IGHV1OR15-9A0A0B4J2B8 117 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 LNP1A1A4G5 178 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 PATE3B3GLJ2 98 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 POLR2EP19388 210 aaKnown RBP19.41■□□□□ 0.7
ATG4D-203ENST00000585752 HOXD9P28356 352 aaPredicted RBP19.41■□□□□ 0.7
ATG4D-203ENST00000585752 ASIC2Q16515 512 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 FUT11Q495W5 492 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 SFMBT2Q5VUG0 894 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 HJURPQ8NCD3 748 aaPredicted RBP19.41■□□□□ 0.7
ATG4D-203ENST00000585752 FOXJ1Q92949 421 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 AZIN2Q96A70 460 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 SIPA1Q96FS4 1042 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 PPP1R13BQ96KQ4 1090 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 TRIM5Q9C035 493 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 POPDC2Q9HBU9 364 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 EVLQ9UI08 416 aaPredicted RBP19.41■□□□□ 0.7
ATG4D-203ENST00000585752 GGA2Q9UJY4 613 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 NAALADL1Q9UQQ1 740 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 TLR6Q9Y2C9 796 aa19.41■□□□□ 0.7
ATG4D-203ENST00000585752 ATXN2Q99700 1313 aaKnown RBP19.41■□□□□ 0.7
ATG4D-203ENST00000585752 LRRC53A6NM62 1247 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 LSM8O95777 96 aaKnown RBP19.4■□□□□ 0.7
ATG4D-203ENST00000585752 MMEP08473 750 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 ADRB1P08588 477 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 PABPC1P11940 636 aaKnown RBP19.4■□□□□ 0.7
ATG4D-203ENST00000585752 GNSP15586 552 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 ITPKAP23677 461 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 OXTRP30559 389 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 HOXD12P35452 270 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 IRX4P78413 519 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 CDR2Q01850 454 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 GFPT1Q06210 699 aaPredicted RBP19.4■□□□□ 0.7
ATG4D-203ENST00000585752 FIGNQ5HY92 759 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 MPP7Q5T2T1 576 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 RFWD3Q6PCD5 774 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 TRIM72Q6ZMU5 477 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 TMPRSS6Q8IU80 811 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 MFN1Q8IWA4 741 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 DQX1Q8TE96 717 aaKnown RBP19.4■□□□□ 0.7
ATG4D-203ENST00000585752 CPLX3Q8WVH0 158 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 NUCKS1Q9H1E3 243 aaKnown RBP19.4■□□□□ 0.7
ATG4D-203ENST00000585752 SLC6A17Q9H1V8 727 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 ABCB8Q9NUT2 735 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 TJP2Q9UDY2 1190 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 CLEC4EQ9ULY5 219 aa19.4■□□□□ 0.7
ATG4D-203ENST00000585752 CKAP5Q14008 2032 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 MEI4A8MW99 385 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 E5RJQ4 531 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 MOCS3O95396 460 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 MOCS2O96007 188 aaPredicted RBP19.39■□□□□ 0.69
ATG4D-203ENST00000585752 CD6P30203 668 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 MAPK8P45983 427 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 ST8SIA6P61647 398 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 YWHAZP63104 245 aaKnown RBP19.39■□□□□ 0.69
ATG4D-203ENST00000585752 NNTQ13423 1086 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 TRIM14Q14142 442 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 WDR45BQ5MNZ6 344 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 PIK3R6Q5UE93 754 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 SLC23A3Q6PIS1 610 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 CARNMT1Q8N4J0 409 aa19.39■□□□□ 0.69
ATG4D-203ENST00000585752 SLC20A1Q8WUM9 679 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms