RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 SPATS2LQ9NUQ6 558 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PPM1HQ9ULR3 514 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 AHCYL1O43865 530 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 SMIM24O75264 130 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PROCP04070 461 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 LCP1P13796 627 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ALOX15P16050 662 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CRABP2P29373 138 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ERFP50548 548 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 SLC25A3Q00325 362 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PDE1BQ01064 536 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 DCAF4L1Q3SXM0 396 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 AAGABQ6PD74 315 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 IZUMO2Q6UXV1 221 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 C10orf107Q8IVU9 208 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 TSC22D3Q99576 134 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 TTC1Q99614 292 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PIH1D1Q9NWS0 290 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 DNAJC28Q9NX36 388 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.59□□□□□ -0.074e-8■□□□□ 8
CDK5RAP3-237ENST00000585163 TUBGCP4Q9UGJ1 667 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ASB14A6NK59 587 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 RNF103O00237 685 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 HCRTO43612 131 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 MFSD11O43934 449 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 MYL4P12829 197 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CCDC130P13994 396 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 IDH3AP50213 366 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CACNA2D1P54289 1103 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 RNF220Q5VTB9 566 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ARMCX2Q7L311 632 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ADGRG6Q86SQ4 1221 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 SLC25A41Q8N5S1 370 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 GSTCDQ8NEC7 633 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PPP4R1Q8TF05 950 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 P2RY11Q96G91 374 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ECSITQ9BQ95 431 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 MROH8Q9H579 483 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 COPG2Q9UBF2 871 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 FZD10Q9ULW2 581 aa14.58□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CXCL11O14625 94 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ZNF195O14628 629 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 STK10O94804 968 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ZNF286BP0CG31 522 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CALRP27797 417 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ADORA2BP29275 332 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ARRB2P32121 409 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GLUD2P49448 558 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 COPAP53621 1224 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 EFHC1Q5JVL4 640 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 FAM131BQ86XD5 332 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CRYBG2Q8N1P7 616 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PHC3Q8NDX5 983 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SNX27Q96L92 541 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 C16orf70Q9BSU1 422 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PPP1R12CQ9BZL4 782 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PNPOQ9NVS9 261 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SYBUQ9NX95 663 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SNTG2Q9NY99 539 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TMEM216Q9P0N5 145 aa14.58□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CCNT2O60583 730 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 MATKP42679 507 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ACADSBP45954 432 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 BAG6P46379 1132 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 HARS2P49590 506 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PPM1JQ5JR12 505 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PSTKQ8IV42 348 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GPC2Q8N158 579 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 POU5F2Q8N7G0 328 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PPTC7Q8NI37 304 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SHKBP1Q8TBC3 707 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 C18orf25Q96B23 403 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RALGAPA2Q2PPJ7 1873 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ARHGAP42A6NI28 874 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 BUD23O43709 281 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 BAG2O95816 211 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 POLBP06746 335 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PSMB4P28070 264 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TYK2P29597 1187 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 HOXA11P31270 313 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GP5P40197 560 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SLC25A52Q3SY17 297 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 BSPRYQ5W0U4 402 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TAPT1Q6NXT6 567 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PGM2L1Q6PCE3 622 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 MAMDC4Q6UXC1 1216 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ZNF410Q86VK4 478 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ERO1BQ86YB8 467 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 BEST2Q8NFU1 509 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 OR6Y1Q8NGX8 325 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 KBTBD7Q8WVZ9 684 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 HSFY1Q96LI6 401 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 FERMT1Q9BQL6 677 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 S100A14Q9HCY8 104 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TXNDC16Q9P2K2 825 aa14.57□□□□□ -0.08
CDK5RAP3-237ENST00000585163 KIF3CO14782 793 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 USP1O94782 785 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PDGFRBP09619 1106 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ERVK-10P10266 1014 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms