RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TACR2P21452 398 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 FECHP22830 423 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 CTHP32929 405 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 GJA4P35212 333 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 SOX9P48436 509 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 AIF1P55008 147 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 STARD6P59095 220 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 CDH18Q13634 790 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 IFI16Q16666 785 aaKnown RBP14.34□□□□□ -0.11
TRAF4-215ENST00000584944 SH3PXD2AQ5TCZ1 1133 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 TTC39BQ5VTQ0 682 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-215ENST00000584944 RFWD3Q6PCD5 774 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 RHBDF2Q6PJF5 856 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 NAT16Q8N8M0 369 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 ARHGEF26Q96DR7 871 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 HAPLN3Q96S86 360 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 IRX2Q9BZI1 471 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-215ENST00000584944 DNAJC17Q9NVM6 304 aaKnown RBP14.34□□□□□ -0.11
TRAF4-215ENST00000584944 PLK2Q9NYY3 685 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 SIT1Q9Y3P8 196 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 GOLGA6L7A0A1B0GV03 622 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 H0Y626 953 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 ARNTLO00327 626 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 HOXC11O43248 304 aaPredicted RBP14.33□□□□□ -0.12
TRAF4-215ENST00000584944 DAPK3O43293 454 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 GREM1O60565 184 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 APODP05090 189 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 CCDC175P0C221 793 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 ADRA1BP35368 520 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 ARHGAP25P42331 645 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 HDAC4P56524 1084 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 CCDC173Q0VFZ6 552 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 LRRC32Q14392 662 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 MESDQ14696 234 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 GRAMD4Q6IC98 578 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 TRNP1Q6NT89 227 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 RWDD4Q6NW29 188 aaKnown RBP14.33□□□□□ -0.12
TRAF4-215ENST00000584944 RAD9BQ6WBX8 426 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 CENPIQ92674 756 aaPredicted RBP14.33□□□□□ -0.12
TRAF4-215ENST00000584944 CD101Q93033 1021 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 CALR3Q96L12 384 aaKnown RBP14.33□□□□□ -0.12
TRAF4-215ENST00000584944 PNKPQ96T60 521 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 EPAS1Q99814 870 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 TSGA10Q9BZW7 698 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 SEMA4AQ9H3S1 761 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 ARHGEF38Q9NXL2 777 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 VANGL2Q9ULK5 521 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 NENFQ9UMX5 172 aa14.33□□□□□ -0.12
TRAF4-215ENST00000584944 KANSL1LA0AUZ9 987 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 TBC1D3BA6NDS4 549 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 SPOPO43791 374 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 ENDOD1O94919 500 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 CD72P21854 359 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 GJC1P36383 396 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 DGKGP49619 791 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 VAV2P52735 878 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 ATXN1P54253 815 aaKnown RBP14.32□□□□□ -0.12
TRAF4-215ENST00000584944 KDSRQ06136 332 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 AUHQ13825 339 aaKnown RBP14.32□□□□□ -0.12
TRAF4-215ENST00000584944 PON2Q15165 354 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 E2F5Q15329 346 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 MS4A13Q5J8X5 152 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 PIK3R6Q5UE93 754 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 C1orf210Q8IVY1 113 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 MFN1Q8IWA4 741 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 CARNMT1Q8N4J0 409 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 ACRBPQ8NEB7 543 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 PJA1Q8NG27 643 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 BTBD6Q96KE9 485 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 C1orf74Q96LT6 269 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 PPP1R9BQ96SB3 815 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 DESI2Q9BSY9 194 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 SLC2A11Q9BYW1 496 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 FOXQ1Q9C009 403 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 TRIM7Q9C029 511 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 ZWILCHQ9H900 591 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 ARHGEF4Q9NR80 690 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 MARK1Q9P0L2 795 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 OR12D3Q9UGF7 316 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 STOML2Q9UJZ1 356 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 USP18Q9UMW8 372 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 HS3ST4Q9Y661 456 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 FANCMQ8IYD8 2048 aa14.32□□□□□ -0.12
TRAF4-215ENST00000584944 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-215ENST00000584944 OTOL1A6NHN0 477 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-215ENST00000584944 FAM170BA6NMN3 283 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 KRT86O43790 486 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 CREB3O43889 395 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 CACNG3O60359 315 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 PROSCO94903 275 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 MOCS3O95396 460 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 LMNAP02545 664 aaKnown RBP14.31□□□□□ -0.12
TRAF4-215ENST00000584944 DRD1P21728 446 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 SLC6A4P31645 630 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 PCK1P35558 622 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 EIF2DP41214 584 aaKnown RBP14.31□□□□□ -0.12
TRAF4-215ENST00000584944 OXCT1P55809 520 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 FOXK2Q01167 660 aa14.31□□□□□ -0.12
TRAF4-215ENST00000584944 OGDHQ02218 1023 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms