RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 RIC8AQ9NPQ8 531 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 TMOD4Q9NZQ9 345 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 EPS15L1Q9UBC2 864 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CPNE7Q9UBL6 633 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 MAN2B2Q9Y2E5 1009 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 MAP3K2Q9Y2U5 619 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 TTLL3Q9Y4R7 772 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ZSWIM8A7E2V4 1837 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 C19orf81C9J6K1 198 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 TSPAN4O14817 238 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 POLBP06746 335 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 CPA1P15085 419 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 DDCP20711 480 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 EEF1GP26641 437 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 MC4RP32245 332 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 PIK3CGP48736 1102 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 HK3P52790 923 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 ALDH18A1P54886 795 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 NXPH1P58417 271 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 HGFACQ04756 655 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 KLF10Q13118 480 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 SP140Q13342 867 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 TUBB8Q3ZCM7 444 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 ATXN7L2Q5T6C5 722 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 HAUS3Q68CZ6 603 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 UNC13DQ70J99 1090 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 HTR3DQ70Z44 454 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 FASTKD5Q7L8L6 764 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 KRT78Q8N1N4 520 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 FITM2Q8N6M3 262 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 EID2BQ96D98 161 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 SORBS1Q9BX66 1292 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 AP1M1Q9BXS5 423 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 ZCWPW1Q9H0M4 648 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 ZMAT3Q9HA38 289 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 ATP6V0A4Q9HBG4 840 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 PI4KBQ9UBF8 816 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 SERPINB13Q9UIV8 391 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 PIPSLA2A3N6 862 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 A6NLC8 198 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 CXCL11O14625 94 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 PLA2G6O60733 806 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 PTMAP06454 111 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 APOA4P06727 396 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 C1SP09871 688 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 ALOX15P16050 662 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 HOXB6P17509 224 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 MALP21145 153 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 TGM1P22735 817 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 CALRP27797 417 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 ARL1P40616 181 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 TNNT2P45379 298 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 RPS16P62249 146 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 EXOSC9Q06265 439 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF844Q08AG5 666 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 KRT32Q14532 448 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 POSTNQ15063 836 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 UBE3CQ15386 1083 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 PFKFB4Q16877 469 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 AGAP9Q5VTM2 703 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 RETSATQ6NUM9 610 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 HIBCHQ6NVY1 386 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 KLHL24Q6TFL4 600 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 Q6ZSN1 163 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 TICAM1Q8IUC6 712 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 P3H2Q8IVL5 708 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 ESX1Q8N693 406 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 PPP1R14CQ8TAE6 165 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 STAMQ92783 540 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 ZBTB10Q96DT7 871 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 COG8Q96MW5 612 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 PPP1R9BQ96SB3 815 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 LZTS2Q9BRK4 669 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 TTLL2Q9BWV7 592 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 AMNQ9BXJ7 453 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 C22orf23Q9BZE7 217 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 PITHD1Q9GZP4 211 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 KIAA1683Q9H0B3 1180 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 NOD2Q9HC29 1040 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 ATP8A2Q9NTI2 1148 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 AASSQ9UDR5 926 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 SLC13A4Q9UKG4 626 aa2.09□□□□□ -2.07
SMCHD1-211ENST00000584897 UBN2Q6ZU65 1347 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 PHLPP2Q6ZVD8 1323 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 FSD2A1L4K1 749 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 TMEM200CA6NKL6 621 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 ZNF785A8K8V0 405 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 LGALS16A8MUM7 142 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 M0QYG6 137 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 PDE8BO95263 885 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 PRLP01236 227 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 GRPP07492 148 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 XRCC6P12956 609 aaKnown RBP eCLIP2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 PGM1P36871 562 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 GCLCP48506 637 aaPredicted RBP2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 FLT3LGP49771 235 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 SCNN1GP51170 649 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 FMO1Q01740 532 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 LRMPQ12912 555 aa2.09□□□□□ -2.08
SMCHD1-211ENST00000584897 ANKRD1Q15327 319 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms