RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 CDK17Q00537 523 aa21.53■■□□□ 1.04
TOP3A-218ENST00000584669 FILIP1LQ4L180 1135 aa21.53■■□□□ 1.04
TOP3A-218ENST00000584669 PIK3R6Q5UE93 754 aa21.53■■□□□ 1.04
TOP3A-218ENST00000584669 AZIN2Q96A70 460 aa21.53■■□□□ 1.04
TOP3A-218ENST00000584669 SPACA7Q96KW9 195 aa21.53■■□□□ 1.04
TOP3A-218ENST00000584669 PRICKLE1Q96MT3 831 aaPredicted RBP21.53■■□□□ 1.04
TOP3A-218ENST00000584669 CNTNAP3BQ96NU0 1288 aa21.53■■□□□ 1.04
TOP3A-218ENST00000584669 ACOX2Q99424 681 aa21.53■■□□□ 1.04
TOP3A-218ENST00000584669 EDEM2Q9BV94 578 aa21.53■■□□□ 1.04
TOP3A-218ENST00000584669 CNTNAP3Q9BZ76 1288 aa21.53■■□□□ 1.04
TOP3A-218ENST00000584669 NUCKS1Q9H1E3 243 aaKnown RBP21.53■■□□□ 1.04
TOP3A-218ENST00000584669 DDIT4Q9NX09 232 aa21.53■■□□□ 1.04
TOP3A-218ENST00000584669 MUC22E2RYF6 1773 aaPredicted RBP21.53■■□□□ 1.04
TOP3A-218ENST00000584669 GON4LQ3T8J9 2241 aa21.52■■□□□ 1.04
TOP3A-218ENST00000584669 SERPINC1P01008 464 aa21.52■■□□□ 1.04
TOP3A-218ENST00000584669 ZNF445P59923 1031 aa21.52■■□□□ 1.04
TOP3A-218ENST00000584669 ZDHHC17Q8IUH5 632 aa21.52■■□□□ 1.04
TOP3A-218ENST00000584669 SLC30A5Q8TAD4 765 aa21.52■■□□□ 1.04
TOP3A-218ENST00000584669 KCNV2Q8TDN2 545 aa21.52■■□□□ 1.04
TOP3A-218ENST00000584669 PCDHB18PQ96TA0 734 aa21.52■■□□□ 1.04
TOP3A-218ENST00000584669 SLC2A11Q9BYW1 496 aa21.52■■□□□ 1.04
TOP3A-218ENST00000584669 ADAM33Q9BZ11 813 aa21.52■■□□□ 1.04
TOP3A-218ENST00000584669 CALCOCO1Q9P1Z2 691 aa21.52■■□□□ 1.04
TOP3A-218ENST00000584669 DNAH14Q0VDD8 3507 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 DOCK4Q8N1I0 1966 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 GOLGA8SH3BPF8 625 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 TBL1XO60907 577 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 APOEP02649 317 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 TFE3P19532 575 aaPredicted RBP21.51■■□□□ 1.03
TOP3A-218ENST00000584669 FAM102AQ5T9C2 384 aaPredicted RBP21.51■■□□□ 1.03
TOP3A-218ENST00000584669 OTUD1Q5VV17 481 aaPredicted RBP21.51■■□□□ 1.03
TOP3A-218ENST00000584669 MMS22LQ6ZRQ5 1243 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 ARMCX6Q7L4S7 300 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 TRMT11Q7Z4G4 463 aaKnown RBP21.51■■□□□ 1.03
TOP3A-218ENST00000584669 WFDC5Q8TCV5 224 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 BAP1Q92560 729 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 PIGKQ92643 395 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 ERLEC1Q96DZ1 483 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 STIM2Q9P246 746 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 NUP205Q92621 2012 aa21.51■■□□□ 1.03
TOP3A-218ENST00000584669 NYNRINQ9P2P1 1898 aaKnown RBP21.5■■□□□ 1.03
TOP3A-218ENST00000584669 M0QYT0 321 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 NTSR1P30989 418 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 NOS2P35228 1153 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 SCNN1AP37088 669 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 MATKP42679 507 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 RPS24P62847 133 aaKnown RBP21.5■■□□□ 1.03
TOP3A-218ENST00000584669 FANCCQ00597 558 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 NME3Q13232 169 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 NR1I3Q14994 352 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 MS4A13Q5J8X5 152 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 RAP1GAP2Q684P5 730 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 TMEM215Q68D42 235 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 TRNP1Q6NT89 227 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 TRIM72Q6ZMU5 477 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 LPCAT2Q7L5N7 544 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 ANKS1BQ7Z6G8 1248 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 PHLDB2Q86SQ0 1253 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 MSANTD4Q8NCY6 345 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 OLIG1Q8TAK6 271 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 BTN2A3PQ96KV6 586 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 NPY6RQ99463 290 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 DDX50Q9BQ39 737 aaKnown RBP21.5■■□□□ 1.03
TOP3A-218ENST00000584669 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.5■■□□□ 1.03
TOP3A-218ENST00000584669 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.5■■□□□ 1.03
TOP3A-218ENST00000584669 CACNA1BQ00975 2339 aa21.5■■□□□ 1.03
TOP3A-218ENST00000584669 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 A0A1W2PQC6 194 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 KCNU1A8MYU2 1149 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 WASH3PC4AMC7 463 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 KHNYNO15037 678 aaKnown RBP21.49■■□□□ 1.03
TOP3A-218ENST00000584669 UNGP13051 313 aaPredicted RBP21.49■■□□□ 1.03
TOP3A-218ENST00000584669 HOXB2P14652 356 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 HLA-FP30511 346 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 P2RY2P41231 377 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 TPM4P67936 248 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 TMEFF1Q8IYR6 380 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 CHPFQ8IZ52 775 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 LGI2Q8N0V4 545 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 CFAP52Q8N1V2 620 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 FRMD1Q8N878 549 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 ATP6V0D2Q8N8Y2 350 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 HJURPQ8NCD3 748 aaPredicted RBP21.49■■□□□ 1.03
TOP3A-218ENST00000584669 SORCS1Q8WY21 1168 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 RNF34Q969K3 372 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 C11orf70Q9BRQ4 267 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 CACNA2D2Q9NY47 1150 aa21.49■■□□□ 1.03
TOP3A-218ENST00000584669 PATE3B3GLJ2 98 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 FERP16591 822 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 TACR2P21452 398 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 MMP8P22894 467 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 CCR1P32246 355 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 FLT3P36888 993 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 SULT1E1P49888 294 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 CLEC16AQ2KHT3 1053 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 MPP7Q5T2T1 576 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 IRF2BP2Q7Z5L9 587 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 CHSY1Q86X52 802 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 TBCBQ99426 244 aa21.48■■□□□ 1.03
TOP3A-218ENST00000584669 AGPAT1Q99943 283 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms