RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PRMT1Q99873 361 aaKnown RBP18.92■□□□□ 0.62
RFFL-211ENST00000584541 TRMT61BQ9BVS5 477 aaKnown RBP18.92■□□□□ 0.62
RFFL-211ENST00000584541 TLR10Q9BXR5 811 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 CALN1Q9BXU9 219 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 PCDH18Q9HCL0 1135 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 STIM2Q9P246 746 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 IGSF9Q9P2J2 1179 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 PRKAG3Q9UGI9 489 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 DNAI1Q9UI46 699 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 VANGL2Q9ULK5 521 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 SNX10Q9Y5X0 201 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 WNT6Q9Y6F9 365 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 EEF2KO00418 725 aaKnown RBP18.91■□□□□ 0.62
RFFL-211ENST00000584541 ENC1O14682 589 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 DDX3YO15523 660 aaKnown RBP18.91■□□□□ 0.62
RFFL-211ENST00000584541 DAPK3O43293 454 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 NFATC1O95644 943 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 CASQ1P31415 396 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 SLC6A4P31645 630 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 GGCXP38435 758 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 PEX5P50542 639 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 GRM2Q14416 872 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 TTC39BQ5VTQ0 682 aaPredicted RBP18.91■□□□□ 0.62
RFFL-211ENST00000584541 ATXN2LQ8WWM7 1075 aaKnown RBP18.91■□□□□ 0.62
RFFL-211ENST00000584541 ATP2A3Q93084 1043 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 RNF25Q96BH1 459 aaPredicted RBP18.91■□□□□ 0.62
RFFL-211ENST00000584541 TBC1D31Q96DN5 1066 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 RPRD1AQ96P16 312 aaPredicted RBP18.91■□□□□ 0.62
RFFL-211ENST00000584541 WDR24Q96S15 920 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 PLA2G2FQ9BZM2 168 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 RCOR3Q9P2K3 495 aaPredicted RBP18.91■□□□□ 0.62
RFFL-211ENST00000584541 LIMD1Q9UGP4 676 aa18.91■□□□□ 0.62
RFFL-211ENST00000584541 ESPNB1AK53 854 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 PI4K2BG5E9Z4 385 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 KCNK3O14649 394 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 CHADO15335 359 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 TSPAN3O60637 253 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 LRIG2O94898 1065 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 ATP1A1P05023 1023 aaKnown RBP18.9■□□□□ 0.62
RFFL-211ENST00000584541 ARSEP51690 589 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 COPS2P61201 443 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 SEMA3BQ13214 749 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 DPYSL3Q14195 570 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 MPPE1Q53F39 396 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 SEL1L2Q5TEA6 688 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 RWDD4Q6NW29 188 aaKnown RBP18.9■□□□□ 0.62
RFFL-211ENST00000584541 FBXL22Q6P050 247 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 RFWD3Q6PCD5 774 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 SYT10Q6XYQ8 523 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 VSIG1Q86XK7 387 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 ADHFE1Q8IWW8 467 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 HJURPQ8NCD3 748 aaPredicted RBP18.9■□□□□ 0.62
RFFL-211ENST00000584541 FAM71BQ8TC56 605 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 RAPGEF5Q92565 580 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 ALG3Q92685 438 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 TMA16Q96EY4 203 aaKnown RBP18.9■□□□□ 0.62
RFFL-211ENST00000584541 ZNF670Q9BS34 389 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 MAK16Q9BXY0 300 aaKnown RBP18.9■□□□□ 0.62
RFFL-211ENST00000584541 MAGEB5Q9BZ81 275 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 ZYG11BQ9C0D3 744 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 LINC00597Q9H2U6 94 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 CATSPERBQ9H7T0 1116 aa18.9■□□□□ 0.62
RFFL-211ENST00000584541 PPARGC1AQ9UBK2 798 aaKnown RBP18.9■□□□□ 0.62
RFFL-211ENST00000584541 ZNF487B1APH4 448 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 LOC730098B7Z3J9 87 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 FAM72CH0Y354 149 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 TRDMT1O14717 391 aaKnown RBP18.89■□□□□ 0.61
RFFL-211ENST00000584541 FGF10O15520 208 aaPredicted RBP18.89■□□□□ 0.61
RFFL-211ENST00000584541 ADH1CP00326 375 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 GOT1P17174 413 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 EPHB2P29323 1055 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 GDI1P31150 447 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 HCAR3P49019 387 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 VCPP55072 806 aaKnown RBP18.89■□□□□ 0.61
RFFL-211ENST00000584541 NR1H3Q13133 447 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 EML3Q32P44 896 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 FAM72AQ5TYM5 149 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 MANEALQ5VSG8 457 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 FAM72DQ6L9T8 149 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 TPGS1Q6ZTW0 290 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 RFX8Q6ZV50 586 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 C14orf80Q86SX3 495 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 FAM72BQ86X60 149 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 CCDC117Q8IWD4 279 aaPredicted RBP18.89■□□□□ 0.61
RFFL-211ENST00000584541 ADGRG2Q8IZP9 1017 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 DDI1Q8WTU0 396 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 IRF7Q92985 503 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 FAM83CQ9BQN1 747 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 CARD9Q9H257 536 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 BRD9Q9H8M2 597 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 KCNK12Q9HB15 430 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 SPHK2Q9NRA0 654 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 DONSONQ9NYP3 566 aa18.89■□□□□ 0.61
RFFL-211ENST00000584541 CWC15Q9P013 229 aaKnown RBP18.89■□□□□ 0.61
RFFL-211ENST00000584541 MYOFQ9NZM1 2061 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 IGLV3-10A0A075B6K4 115 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 CD48P09326 243 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 ANO4Q32M45 955 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 C5orf22Q49AR2 442 aa18.88■□□□□ 0.61
RFFL-211ENST00000584541 TFDP3Q5H9I0 405 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms