RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	EFHC2	Q5JST6	749 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	RNF219	Q5W0B1	726 aa	Predicted RBP	10.24	□□□□□ -0.77
NARF-222	ENST00000583908	RFWD3	Q6PCD5	774 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	TMC6	Q7Z403	805 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	C11orf74	Q86VG3	221 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	CARNMT1	Q8N4J0	409 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	USP33	Q8TEY7	942 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	FAM172A	Q8WUF8	416 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	RXFP2	Q8WXD0	754 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.24	□□□□□ -0.77
NARF-222	ENST00000583908	NT5C3B	Q969T7	300 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	CCDC42	Q96M95	316 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	HAPLN3	Q96S86	360 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	PCDHB18P	Q96TA0	734 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	TBCB	Q99426	244 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	DNAJC7	Q99615	494 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	CNPY3	Q9BT09	278 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	PIGV	Q9NUD9	493 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	ABHD10	Q9NUJ1	306 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	ARHGEF38	Q9NXL2	777 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	DONSON	Q9NYP3	566 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.24	□□□□□ -0.77
NARF-222	ENST00000583908	STIM2	Q9P246	746 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	CNOT8	Q9UFF9	292 aa	Known RBP	10.24	□□□□□ -0.77
NARF-222	ENST00000583908	GGA2	Q9UJY4	613 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	FBXO10	Q9UK96	956 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	PLA2G4C	Q9UP65	541 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	TRIO	O75962	3097 aa		10.24	□□□□□ -0.77
NARF-222	ENST00000583908	KIAA1549L	Q6ZVL6	1849 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	SSU72P8	A0A1W2PR75	194 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	FAM170A	A1A519	330 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	DDX3X	O00571	662 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	AKR1B10	O60218	316 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	SYNCRIP	O60506	623 aa	Known RBP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	PAGE1	O75459	146 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	CLDN11	O75508	207 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	KLF8	O95600	359 aa	Predicted RBP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	PABPC1	P11940	636 aa	Known RBP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	SKIL	P12757	684 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	HOXB2	P14652	356 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	POLR2E	P19388	210 aa	Known RBP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	PSMA2	P25787	234 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	ETFB	P38117	255 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	NNMT	P40261	264 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	SATB1	Q01826	763 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	NHLH1	Q02575	133 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	SULT2A1	Q06520	285 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	PTP4A2	Q12974	167 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	ZNF177	Q13360	481 aa	Predicted RBP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	EIF4EBP2	Q13542	120 aa	Predicted RBP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	BYSL	Q13895	437 aa	Known RBP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	C6orf118	Q5T5N4	469 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	NAIF1	Q69YI7	327 aa	Predicted RBP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	NADSYN1	Q6IA69	706 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	CHST9	Q7L1S5	443 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	LONP2	Q86WA8	852 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	FAM131B	Q86XD5	332 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	PHTF2	Q8N3S3	785 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	ALLC	Q8N6M5	410 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	EMC1	Q8N766	993 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	FIBIN	Q8TAL6	211 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	FNIP1	Q8TF40	1166 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	MRFAP1L1	Q96HT8	127 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	SPACA7	Q96KW9	195 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	C1orf74	Q96LT6	269 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	PRICKLE1	Q96MT3	831 aa	Predicted RBP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	SYT11	Q9BT88	431 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	RETREG1	Q9H6L5	497 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	FBRS	Q9HAH7	460 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	ABCB8	Q9NUT2	735 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
NARF-222	ENST00000583908	ADAMTS1	Q9UHI8	967 aa		10.23	□□□□□ -0.77
NARF-222	ENST00000583908	MUC6	Q6W4X9	2439 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	GOLGA6L7	A0A1B0GV03	622 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	EIF3CL	B5ME19	914 aa	Known RBP	10.22	□□□□□ -0.77
NARF-222	ENST00000583908	ENDOD1	O94919	500 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	CISD3	P0C7P0	127 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	HNRNPL	P14866	589 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
NARF-222	ENST00000583908	SLC6A4	P31645	630 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	HTR7	P34969	479 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	RFC1	P35251	1148 aa	Predicted RBP	10.22	□□□□□ -0.77
NARF-222	ENST00000583908	PLA2G5	P39877	138 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	KIR2DL1	P43626	348 aa	Predicted RBP	10.22	□□□□□ -0.77
NARF-222	ENST00000583908	CDH4	P55283	916 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	PITX1	P78337	314 aa	Predicted RBP	10.22	□□□□□ -0.77
NARF-222	ENST00000583908	MAMLD1	Q13495	774 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	AUH	Q13825	339 aa	Known RBP	10.22	□□□□□ -0.77
NARF-222	ENST00000583908	ARID5B	Q14865	1188 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	ACAP1	Q15027	740 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	CRY1	Q16526	586 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	SLC18A3	Q16572	532 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	CCDC14	Q49A88	953 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	FNDC3B	Q53EP0	1204 aa	Known RBP	10.22	□□□□□ -0.77
NARF-222	ENST00000583908	CCDC122	Q5T0U0	273 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	E4F1	Q66K89	784 aa	Predicted RBP	10.22	□□□□□ -0.77
NARF-222	ENST00000583908	HGSNAT	Q68CP4	663 aa		10.22	□□□□□ -0.77
NARF-222	ENST00000583908	PLEKHA7	Q6IQ23	1121 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms