RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 FAM171BQ6P995 826 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 TMEM92Q6UXU6 159 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 MMS22LQ6ZRQ5 1243 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 SLFN11Q7Z7L1 901 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 TTC30AQ86WT1 665 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 TMEFF1Q8IYR6 380 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 MRPS31Q92665 395 aaKnown RBP18.64■□□□□ 0.57
SNX11-212ENST00000583320 CYP2S1Q96SQ9 504 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 NAPGQ99747 312 aaPredicted RBP18.64■□□□□ 0.57
SNX11-212ENST00000583320 C11orf70Q9BRQ4 267 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 CRTAC1Q9NQ79 661 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 FAM49BQ9NUQ9 324 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 CTTNBP2NLQ9P2B4 639 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 LCMT1Q9UIC8 334 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 JRKLQ9Y4A0 524 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 ACACAQ13085 2346 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 MAST4O15021 2626 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 PCDH15Q96QU1 1955 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 GRID2IPA4D2P6 1211 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 FAM221BA6H8Z2 402 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 HCRTO43612 131 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 KALRNO60229 2985 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 RRM1P23921 792 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 P2RY2P41231 377 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 RPL34P49207 117 aaKnown RBP18.63■□□□□ 0.57
SNX11-212ENST00000583320 TSPY1Q01534 308 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 MESP2Q0VG99 397 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 PDCLQ13371 301 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 TUBB2AQ13885 445 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 PDZD3Q86UT5 571 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 LRRC57Q8N9N7 239 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 MYCBPAPQ8TBZ2 947 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 SPPL2BQ8TCT7 592 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 IPO4Q8TEX9 1081 aaKnown RBP18.63■□□□□ 0.57
SNX11-212ENST00000583320 SLC35F5Q8WV83 523 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 ATP2A3Q93084 1043 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 C18orf8Q96DM3 657 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 TUBB2BQ9BVA1 445 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 NUP85Q9BW27 656 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 SLC4A5Q9BY07 1137 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 LINC00597Q9H2U6 94 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 TRPC7Q9HCX4 862 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 PARVAQ9NVD7 372 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 MMP17Q9ULZ9 603 aa18.63■□□□□ 0.57
SNX11-212ENST00000583320 ANAPC1Q9H1A4 1944 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 PLXND1Q9Y4D7 1925 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 ATP2C2O75185 946 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 CCDC130P13994 396 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 ACAT1P24752 427 aaKnown RBP18.62■□□□□ 0.57
SNX11-212ENST00000583320 IFNAR2P48551 515 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 SLC8A3P57103 927 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 PSMC1P62191 440 aaKnown RBP18.62■□□□□ 0.57
SNX11-212ENST00000583320 CRY1Q16526 586 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 CCDC142Q17RM4 750 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 COL28A1Q2UY09 1125 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 PTPN20Q4JDL3 420 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 C11orf63Q6NUN7 778 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 FUKQ8N0W3 1084 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 C3orf20Q8ND61 904 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 UBA3Q8TBC4 463 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 ZNF564Q8TBZ8 553 aaPredicted RBP18.62■□□□□ 0.57
SNX11-212ENST00000583320 SLC2A14Q8TDB8 520 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 C2orf15Q8WU43 125 aaKnown RBP18.62■□□□□ 0.57
SNX11-212ENST00000583320 ZNF592Q92610 1267 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 HSFY1Q96LI6 401 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 BBC3Q96PG8 261 aaPredicted RBP18.62■□□□□ 0.57
SNX11-212ENST00000583320 PKMYT1Q99640 499 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 NUSAP1Q9BXS6 441 aaKnown RBP18.62■□□□□ 0.57
SNX11-212ENST00000583320 DUSP16Q9BY84 665 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 CYTH4Q9UIA0 394 aa18.62■□□□□ 0.57
SNX11-212ENST00000583320 HELZP42694 1942 aaKnown RBP18.62■□□□□ 0.57
SNX11-212ENST00000583320 TCRBV5S1A1TA0A578 114 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 TNFRSF10BO14763 440 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 XPO1O14980 1071 aaKnown RBP18.61■□□□□ 0.57
SNX11-212ENST00000583320 FANCGO15287 622 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 PALMO75781 387 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 ACADSBP45954 432 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 PLA2G4AP47712 749 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 PDE4CQ08493 712 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 MAMLD1Q13495 774 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 DDR2Q16832 855 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 MDH1BQ5I0G3 518 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 PAPD7Q5XG87 772 aaKnown RBP18.61■□□□□ 0.57
SNX11-212ENST00000583320 LPCAT2Q7L5N7 544 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 RAB44Q7Z6P3 723 aaPredicted RBP18.61■□□□□ 0.57
SNX11-212ENST00000583320 TMEM110Q86TL2 294 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 SYT12Q8IV01 421 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 OR2I1PQ8NGU4 316 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 EXOC4Q96A65 974 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 UBXN6Q9BZV1 441 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 ABCB6Q9NP58 842 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 OSGEPQ9NPF4 335 aa18.61■□□□□ 0.57
SNX11-212ENST00000583320 CFAP46Q8IYW2 2715 aa18.6■□□□□ 0.57
SNX11-212ENST00000583320 UPK3BL1B0FP48 263 aa18.6■□□□□ 0.57
SNX11-212ENST00000583320 UPK3BL2E5RIL1 263 aa18.6■□□□□ 0.57
SNX11-212ENST00000583320 PRLRP16471 622 aa18.6■□□□□ 0.57
SNX11-212ENST00000583320 ITPKAP23677 461 aa18.6■□□□□ 0.57
SNX11-212ENST00000583320 ADORA2BP29275 332 aa18.6■□□□□ 0.57
SNX11-212ENST00000583320 SCNN1AP37088 669 aa18.6■□□□□ 0.57
SNX11-212ENST00000583320 SCAPQ12770 1279 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms