RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 POLR2AP24928 1970 aaKnown RBP10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 MEFVO15553 781 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 C1RP00736 705 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 CHN1P15882 459 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 GP5P40197 560 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 MARCKSL1P49006 195 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 MGAT3Q09327 533 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 GRM3Q14832 879 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 PMF1Q6P1K2 205 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 DENND5BQ6ZUT9 1274 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 FBXO36Q8NEA4 188 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 APOPT1Q96IL0 206 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 ASB2Q96Q27 587 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 MRM3Q9HC36 420 aaKnown RBP10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 DNMT3LQ9UJW3 386 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 HEATR9A2RTY3 570 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 E7ESA3 106 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 TFRCP02786 760 aaKnown RBP10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 CXCR3P49682 368 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 LPIN1Q14693 890 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 CCL14Q16627 93 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 UPP1Q16831 310 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 TTC31Q49AM3 519 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 KCNT2Q6UVM3 1135 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 KIAA0408Q6ZU52 694 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 NUDT18Q6ZVK8 323 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 SCUBE3Q8IX30 993 aa10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 ARIH1Q9Y4X5 557 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC8-211ENST00000582539 CASTOR2A6NHX0 329 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 MAGEA9P43362 315 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 SPATA21Q7Z572 469 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 TTC30AQ86WT1 665 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 TSEN2Q8NCE0 465 aaKnown RBP10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 ATG4AQ8WYN0 398 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 MRPS31Q92665 395 aaKnown RBP10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 TGS1Q96RS0 853 aaKnown RBP10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 EBNA1BP2Q99848 306 aaKnown RBP10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 ZYG11BQ9C0D3 744 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 VCX3BQ9H321 246 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 CSNK1G1Q9HCP0 422 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 MKS1Q9NXB0 559 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 TLR6Q9Y2C9 796 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 TRIM17Q9Y577 477 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 IRAK2O43187 625 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 CRABP2P29373 138 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 SMTNL2Q2TAL5 461 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 BSPRYQ5W0U4 402 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 ZDHHC24Q6UX98 284 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 COLGALT1Q8NBJ5 622 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 CD99L2Q8TCZ2 262 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 TMEM121Q9BTD3 319 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 TXLNGYQ9BZA5 131 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 ZCWPW1Q9H0M4 648 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 SEMA4AQ9H3S1 761 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 EML4Q9HC35 981 aaKnown RBP10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 PPARGC1AQ9UBK2 798 aaKnown RBP10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 TMEM120BA0PK00 339 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 FAM189BP81408 668 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 PPIGQ13427 754 aaKnown RBP eCLIP10.4□□□□□ -0.742e-6■■■□□ 17.2
TRAPPC8-211ENST00000582539 ITGA9Q13797 1035 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 ANKRD20A2Q5SQ80 823 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 ANKRD20A1Q5TYW2 823 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 PM20D1Q6GTS8 502 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 UGT3A1Q6NUS8 523 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 RHBDF2Q6PJF5 856 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 CLEC20AQ6ZU45 233 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 PPM1NQ8N819 430 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 PAFAH2Q99487 392 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 B3GNT5Q9BYG0 378 aa10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 AFF4Q9UHB7 1163 aaKnown RBP10.4□□□□□ -0.74
TRAPPC8-211ENST00000582539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 RNF103O00237 685 aa10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 SLC9A3R1O14745 358 aaPredicted RBP10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 ZNF177Q13360 481 aaPredicted RBP10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 AUHQ13825 339 aaKnown RBP10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 MAPRE2Q15555 327 aa10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 FAM171BQ6P995 826 aa10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 CHSY1Q86X52 802 aa10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 SAMD11Q96NU1 681 aa10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 ABI2Q9NYB9 513 aaPredicted RBP10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 SEPT3Q9UH03 358 aa10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 RRP15Q9Y3B9 282 aaKnown RBP10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 COMMD10Q9Y6G5 202 aa10.4□□□□□ -0.75
TRAPPC8-211ENST00000582539 FANCGO15287 622 aa10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 TRPA1O75762 1119 aa10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 S100BP04271 92 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 FAM153BP0C7A2 387 aa10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 CKBP12277 381 aa10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 IFNAR2P48551 515 aa10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 PPIDQ08752 370 aaKnown RBP10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 SIX1Q15475 284 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 MGAT5BQ3V5L5 792 aa10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 FAM153CQ494X1 144 aa10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 PCID2Q5JVF3 399 aa10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 C10orf120Q5SQS8 335 aa10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 PDE12Q6L8Q7 609 aaKnown RBP10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 TTC27Q6P3X3 843 aa10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 CMTR2Q8IYT2 770 aaKnown RBP10.39□□□□□ -0.75
TRAPPC8-211ENST00000582539 FUKQ8N0W3 1084 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms