RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 CROCCP2Q86T23 111 aa11.54□□□□□ -0.56
GGA3-213ENST00000582486 VPS52Q8N1B4 723 aa11.54□□□□□ -0.56
GGA3-213ENST00000582486 PYROXD1Q8WU10 500 aa11.54□□□□□ -0.56
GGA3-213ENST00000582486 TLCD1Q96CP7 247 aa11.54□□□□□ -0.56
GGA3-213ENST00000582486 FCRL2Q96LA5 508 aaPredicted RBP11.54□□□□□ -0.56
GGA3-213ENST00000582486 TTC25Q96NG3 672 aa11.54□□□□□ -0.56
GGA3-213ENST00000582486 WDR83Q9BRX9 315 aaKnown RBP11.54□□□□□ -0.56
GGA3-213ENST00000582486 CEP41Q9BYV8 373 aa11.54□□□□□ -0.56
GGA3-213ENST00000582486 NUP205Q92621 2012 aa11.54□□□□□ -0.56
GGA3-213ENST00000582486 PLXNA3P51805 1871 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 A0A0A0MRY4 1105 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 KCNU1A8MYU2 1149 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 AVILO75366 819 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 ABHD2P08910 425 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 C1QTNF8P60827 252 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 RPL10AP62906 217 aaKnown RBP11.53□□□□□ -0.56
GGA3-213ENST00000582486 SKOR1P84550 965 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 EFEMP1Q12805 493 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
GGA3-213ENST00000582486 EMC10Q5UCC4 262 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 TTC19Q6DKK2 380 aaPredicted RBP11.53□□□□□ -0.56
GGA3-213ENST00000582486 MFSD5Q6N075 450 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 MSANTD2Q6P1R3 559 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 C4orf22Q6V702 233 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 ARHGEF18Q6ZSZ5 1173 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 FBXO36Q8NEA4 188 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 TMEM169Q96HH4 297 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 SPATA13Q96N96 652 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 ZNF558Q96NG5 402 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 CLSTN3Q9BQT9 956 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 PHACTR1Q9C0D0 580 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 VPS37BQ9H9H4 285 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 TLR8Q9NR97 1041 aaKnown RBP11.53□□□□□ -0.56
GGA3-213ENST00000582486 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.53□□□□□ -0.56
GGA3-213ENST00000582486 SEPT10Q9P0V9 454 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 MAGED2Q9UNF1 606 aaPredicted RBP11.53□□□□□ -0.56
GGA3-213ENST00000582486 NEU3Q9UQ49 428 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 TLR6Q9Y2C9 796 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 BACE2Q9Y5Z0 518 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 MYO18AQ92614 2054 aaKnown RBP11.53□□□□□ -0.56
GGA3-213ENST00000582486 LTBP2Q14767 1821 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 A0A087WUV0 522 aaPredicted RBP11.53□□□□□ -0.56
GGA3-213ENST00000582486 F5H423 210 aaPredicted RBP11.53□□□□□ -0.56
GGA3-213ENST00000582486 RNF103O00237 685 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 EIF3HO15372 352 aaKnown RBP eCLIP11.53□□□□□ -0.568e-7■■■■■ 29.8
GGA3-213ENST00000582486 SOD2P04179 222 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 CAPN2P17655 700 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 GPX6P59796 221 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 STAT4Q14765 748 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 OTOP2Q7RTS6 562 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 SLC39A11Q8N1S5 342 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 TMEM199Q8N511 208 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 SLC39A13Q96H72 371 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 SERPINB12Q96P63 405 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 CAPS2Q9BXY5 557 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 CLIC5Q9NZA1 410 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 CTNNAL1Q9UBT7 734 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 ZMYND8Q9ULU4 1186 aaPredicted RBP11.53□□□□□ -0.56
GGA3-213ENST00000582486 HS3ST4Q9Y661 456 aa11.53□□□□□ -0.56
GGA3-213ENST00000582486 MRPL42Q9Y6G3 142 aaKnown RBP11.53□□□□□ -0.56
GGA3-213ENST00000582486 CLUHO75153 1309 aa11.52□□□□□ -0.56
GGA3-213ENST00000582486 SLC38A8A6NNN8 435 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 KCNK1O00180 336 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 TCEA3O75764 348 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 SSTR1P30872 391 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 SERPINB6P35237 376 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 MAGEA6P43360 314 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 TBX4P57082 545 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 SLC20A2Q08357 652 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 WASHC5Q12768 1159 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 TNFAIP8L3Q5GJ75 292 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 MIB1Q86YT6 1006 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 IGDCC3Q8IVU1 814 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 COLGALT1Q8NBJ5 622 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 DEPDC1BQ8WUY9 529 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 CELF6Q96J87 481 aaKnown RBP11.52□□□□□ -0.57
GGA3-213ENST00000582486 FERMT1Q9BQL6 677 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 CCDC77Q9BR77 488 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 RAD54BQ9Y620 910 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 GREB1Q4ZG55 1949 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 LAMA3Q16787 3333 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 NCAM2O15394 837 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 STK10O94804 968 aaKnown RBP11.52□□□□□ -0.57
GGA3-213ENST00000582486 SEC24AO95486 1093 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 AGTP01019 485 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 PSEN1P49768 467 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 PPP2R2AP63151 447 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 DSG1Q02413 1049 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 PPIDQ08752 370 aaKnown RBP11.52□□□□□ -0.57
GGA3-213ENST00000582486 C10orf120Q5SQS8 335 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 ARTNQ5T4W7 220 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 MANEALQ5VSG8 457 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 PPP1R21Q6ZMI0 780 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 C3orf62Q6ZUJ4 267 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 C14orf80Q86SX3 495 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 CAND1Q86VP6 1230 aaKnown RBP11.52□□□□□ -0.57
GGA3-213ENST00000582486 ZNF567Q8N184 647 aa11.52□□□□□ -0.57
GGA3-213ENST00000582486 AGGF1Q8N302 714 aaeCLIP11.52□□□□□ -0.57
GGA3-213ENST00000582486 COMMD8Q9NX08 183 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms