RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 CDX2Q99626 313 aaPredicted RBP15.09■□□□□ 0.01
MKS1-211ENST00000581761 VN1R3Q9BXE9 311 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 ROPN1BQ9BZX4 212 aaPredicted RBP15.09■□□□□ 0.01
MKS1-211ENST00000581761 OSBPL2Q9H1P3 480 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 CRISPLD1Q9H336 500 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 ROPN1Q9HAT0 212 aaPredicted RBP15.09■□□□□ 0.01
MKS1-211ENST00000581761 RAB6BQ9NRW1 208 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 OSER1Q9NX31 292 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 IL37Q9NZH6 218 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 NUDT5Q9UKK9 219 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 NOVA2Q9UNW9 492 aaKnown RBP15.09■□□□□ 0.01
MKS1-211ENST00000581761 BACE2Q9Y5Z0 518 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 RAD54BQ9Y620 910 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 PLXNA3P51805 1871 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 LCHNA4D1U4 455 aa15.08■□□□□ 0
MKS1-211ENST00000581761 C5orf60A6NFR6 353 aa15.08■□□□□ 0
MKS1-211ENST00000581761 RASGRF2O14827 1237 aa15.08■□□□□ 0
MKS1-211ENST00000581761 ALOX15BO15296 676 aa15.08■□□□□ 0
MKS1-211ENST00000581761 ADAM12O43184 909 aa15.08■□□□□ 0
MKS1-211ENST00000581761 STK10O94804 968 aaKnown RBP15.08■□□□□ 0
MKS1-211ENST00000581761 GJB5O95377 273 aa15.08■□□□□ 0
MKS1-211ENST00000581761 EFEMP2O95967 443 aa15.08■□□□□ 0
MKS1-211ENST00000581761 ABHD2P08910 425 aa15.08■□□□□ 0
MKS1-211ENST00000581761 RPL17P18621 184 aaKnown RBP15.08■□□□□ 0
MKS1-211ENST00000581761 NR1D1P20393 614 aa15.08■□□□□ 0
MKS1-211ENST00000581761 CCR1P32246 355 aa15.08■□□□□ 0
MKS1-211ENST00000581761 GAD2Q05329 585 aa15.08■□□□□ 0
MKS1-211ENST00000581761 AP1B1Q10567 949 aa15.08■□□□□ 0
MKS1-211ENST00000581761 DUSP4Q13115 394 aa15.08■□□□□ 0
MKS1-211ENST00000581761 EIF4EBP2Q13542 120 aaPredicted RBP15.08■□□□□ 0
MKS1-211ENST00000581761 BTG3Q14201 252 aaPredicted RBP15.08■□□□□ 0
MKS1-211ENST00000581761 PPP2R5DQ14738 602 aa15.08■□□□□ 0
MKS1-211ENST00000581761 DNAJC21Q5F1R6 531 aaKnown RBP15.08■□□□□ 0
MKS1-211ENST00000581761 FAM182AQ5T1J6 154 aa15.08■□□□□ 0
MKS1-211ENST00000581761 FAXCQ5TGI0 409 aa15.08■□□□□ 0
MKS1-211ENST00000581761 PPP1R21Q6ZMI0 780 aa15.08■□□□□ 0
MKS1-211ENST00000581761 ARHGEF18Q6ZSZ5 1173 aa15.08■□□□□ 0
MKS1-211ENST00000581761 CCDC13Q8IYE1 715 aa15.08■□□□□ 0
MKS1-211ENST00000581761 ZBED8Q8IZ13 594 aa15.08■□□□□ 0
MKS1-211ENST00000581761 NETO2Q8NC67 525 aa15.08■□□□□ 0
MKS1-211ENST00000581761 TIFAQ96CG3 184 aa15.08■□□□□ 0
MKS1-211ENST00000581761 FERMT1Q9BQL6 677 aa15.08■□□□□ 0
MKS1-211ENST00000581761 HERC2P3Q9BVR0 1158 aa15.08■□□□□ 0
MKS1-211ENST00000581761 PHACTR1Q9C0D0 580 aa15.08■□□□□ 0
MKS1-211ENST00000581761 KLC2Q9H0B6 622 aa15.08■□□□□ 0
MKS1-211ENST00000581761 TMEM51Q9NW97 253 aa15.08■□□□□ 0
MKS1-211ENST00000581761 PSD3Q9NYI0 1048 aa15.08■□□□□ 0
MKS1-211ENST00000581761 OR12D3Q9UGF7 316 aa15.08■□□□□ 0
MKS1-211ENST00000581761 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.08■□□□□ 0
MKS1-211ENST00000581761 COL4A6Q14031 1691 aa15.07■□□□□ 0
MKS1-211ENST00000581761 TMEM265A0A087WTH1 108 aa15.07■□□□□ 0
MKS1-211ENST00000581761 A0A087WUV0 522 aaPredicted RBP15.07■□□□□ 0
MKS1-211ENST00000581761 FAM92AA1XBS5 289 aa15.07■□□□□ 0
MKS1-211ENST00000581761 WDR27A2RRH5 827 aa15.07■□□□□ 0
MKS1-211ENST00000581761 SLC38A8A6NNN8 435 aa15.07■□□□□ 0
MKS1-211ENST00000581761 RGS16O15492 202 aaPredicted RBP15.07■□□□□ 0
MKS1-211ENST00000581761 PAGE1O75459 146 aa15.07■□□□□ 0
MKS1-211ENST00000581761 BANF1O75531 89 aa15.07■□□□□ 0
MKS1-211ENST00000581761 ZNF189O75820 626 aaPredicted RBP15.07■□□□□ 0
MKS1-211ENST00000581761 LRIG2O94898 1065 aa15.07■□□□□ 0
MKS1-211ENST00000581761 SOD2P04179 222 aa15.07■□□□□ 0
MKS1-211ENST00000581761 IVLP07476 585 aa15.07■□□□□ 0
MKS1-211ENST00000581761 LAG3P18627 525 aa15.07■□□□□ 0
MKS1-211ENST00000581761 OR1D2P34982 312 aa15.07■□□□□ 0
MKS1-211ENST00000581761 SLCO1A2P46721 670 aa15.07■□□□□ 0
MKS1-211ENST00000581761 LMAN1P49257 510 aa15.07■□□□□ 0
MKS1-211ENST00000581761 FASTKD3Q14CZ7 662 aaKnown RBP15.07■□□□□ 0
MKS1-211ENST00000581761 PRKD1Q15139 912 aaPredicted RBP15.07■□□□□ 0
MKS1-211ENST00000581761 BBS9Q3SYG4 887 aa15.07■□□□□ 0
MKS1-211ENST00000581761 HP1BP3Q5SSJ5 553 aaPredicted RBP15.07■□□□□ 0
MKS1-211ENST00000581761 FNBP1LQ5T0N5 605 aa15.07■□□□□ 0
MKS1-211ENST00000581761 KDM7AQ6ZMT4 941 aa15.07■□□□□ 0
MKS1-211ENST00000581761 SPRED2Q7Z698 418 aa15.07■□□□□ 0
MKS1-211ENST00000581761 ANKMY2Q8IV38 441 aa15.07■□□□□ 0
MKS1-211ENST00000581761 CMTR2Q8IYT2 770 aaKnown RBP15.07■□□□□ 0
MKS1-211ENST00000581761 RNF168Q8IYW5 571 aaPredicted RBP15.07■□□□□ 0
MKS1-211ENST00000581761 PDIK1LQ8N165 341 aa15.07■□□□□ 0
MKS1-211ENST00000581761 SLC39A11Q8N1S5 342 aa15.07■□□□□ 0
MKS1-211ENST00000581761 GIPC2Q8TF65 315 aa15.07■□□□□ 0
MKS1-211ENST00000581761 MYLIPQ8WY64 445 aa15.07■□□□□ 0
MKS1-211ENST00000581761 TLCD1Q96CP7 247 aa15.07■□□□□ 0
MKS1-211ENST00000581761 ZNF689Q96CS4 500 aaPredicted RBP15.07■□□□□ 0
MKS1-211ENST00000581761 TMEM169Q96HH4 297 aa15.07■□□□□ 0
MKS1-211ENST00000581761 HAPLN3Q96S86 360 aa15.07■□□□□ 0
MKS1-211ENST00000581761 LGMNQ99538 433 aa15.07■□□□□ 0
MKS1-211ENST00000581761 CCDC77Q9BR77 488 aa15.07■□□□□ 0
MKS1-211ENST00000581761 SIK2Q9H0K1 926 aa15.07■□□□□ 0
MKS1-211ENST00000581761 NKX2-4Q9H2Z4 354 aa15.07■□□□□ 0
MKS1-211ENST00000581761 PRDM12Q9H4Q4 367 aa15.07■□□□□ 0
MKS1-211ENST00000581761 VPS37BQ9H9H4 285 aa15.07■□□□□ 0
MKS1-211ENST00000581761 ETNK1Q9HBU6 452 aa15.07■□□□□ 0
MKS1-211ENST00000581761 TLR8Q9NR97 1041 aaKnown RBP15.07■□□□□ 0
MKS1-211ENST00000581761 SEPT10Q9P0V9 454 aa15.07■□□□□ 0
MKS1-211ENST00000581761 MSRAQ9UJ68 235 aa15.07■□□□□ 0
MKS1-211ENST00000581761 PCDHA11Q9Y5I1 949 aa15.07■□□□□ 0
MKS1-211ENST00000581761 TRANK1O15050 2925 aa15.06■□□□□ 0
MKS1-211ENST00000581761 A0A0A0MRY4 1105 aa15.06■□□□□ 0
MKS1-211ENST00000581761 C2CD2LO14523 706 aa15.06■□□□□ 0
MKS1-211ENST00000581761 MOCS2O96007 188 aaPredicted RBP15.06■□□□□ 0
MKS1-211ENST00000581761 CA3P07451 260 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms