RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 NUP205Q92621 2012 aa13.05□□□□□ -0.32
CDK5RAP3-222ENST00000581708 LAMA1P25391 3075 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 IGHV1OR15-9A0A0B4J2B8 117 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 LGALS16A8MUM7 142 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 KHNYNO15037 678 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 MOCS3O95396 460 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 F9P00740 461 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 IGLV3-19P01714 112 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 ZNF18P17022 549 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 POLR2EP19388 210 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 SLC6A4P31645 630 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 MATKP42679 507 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 DHPSP49366 369 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 LMAN2Q12907 356 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 CAMK2GQ13555 558 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 ARID5BQ14865 1188 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 SF3A2Q15428 464 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 PTPN20Q4JDL3 420 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 ZC3H12AQ5D1E8 599 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 RABGAP1LQ5R372 815 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 PEAR1Q5VY43 1037 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 LYSMD4Q5XG99 296 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 OR6B2Q6IFH4 312 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 TRIM72Q6ZMU5 477 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 FAM183BPQ6ZVS7 135 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 MFN1Q8IWA4 741 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 DEFB106AQ8N104 65 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 CEP76Q8TAP6 659 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 ADAM32Q8TC27 787 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 EPS8L1Q8TE68 723 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 RLN3Q8WXF3 142 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 TTC17Q96AE7 1141 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 C18orf8Q96DM3 657 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 PGAP3Q96FM1 320 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 LMLNQ96KR4 655 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 BPIFA3Q9BQP9 254 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 PCED1AQ9H1Q7 454 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 VPS16Q9H269 839 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 GANQ9H2C0 597 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 FAM204AQ9H8W3 233 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 PRDM16Q9HAZ2 1276 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 ITM2CQ9NQX7 267 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 DDIT4Q9NX09 232 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 KIAA1522Q9P206 1035 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 USP36Q9P275 1121 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 SUN2Q9UH99 717 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 STAP1Q9ULZ2 295 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 INVSQ9Y283 1065 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 CKAP5Q14008 2032 aa13.04□□□□□ -0.32
CDK5RAP3-222ENST00000581708 GOLGA6L7A0A1B0GV03 622 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 WASH3PC4AMC7 463 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 F5H5T6 163 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 LUC7L3O95232 432 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 ERBB2P04626 1255 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 EPHX1P07099 455 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 SGSHP51688 502 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 COPB1P53618 953 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 RPL6Q02878 288 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 CDH18Q13634 790 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 TAF5Q15542 800 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 BRMS1LQ5PSV4 323 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 MBLAC2Q68D91 279 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 IL31Q6EBC2 164 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 CHSY1Q86X52 802 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 ERICH1Q86X53 443 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 CADM4Q8NFZ8 388 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 OR2T3Q8NH03 318 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 PRCCQ92733 491 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 NT5C3BQ969T7 300 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 SIPA1Q96FS4 1042 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 ZNF419Q96HQ0 510 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 PRICKLE1Q96MT3 831 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 ERGIC2Q96RQ1 377 aa13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 NUCKS1Q9H1E3 243 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDK5RAP3-222ENST00000581708 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 MOCS2O96007 188 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SRPRAP08240 638 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PNMA6AP0CW24 399 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CDK11BP21127 795 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 TACR2P21452 398 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 PRKCHP24723 683 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CD6P30203 668 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CD70P32970 193 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SOX5P35711 763 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 STAT1P42224 750 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 JAM2P57087 298 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 ST8SIA6P61647 398 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 RPS24P62847 133 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 CDR2Q01850 454 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 TYRO3Q06418 890 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SULT2A1Q06520 285 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SFSWAPQ12872 951 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 FNDC3BQ53EP0 1204 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SYCP2LQ5T4T6 812 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 STPG1Q5TH74 334 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SLC23A3Q6PIS1 610 aa13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 KIAA1324Q6UXG2 1013 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-222ENST00000581708 SND1Q7KZF4 910 aaKnown RBP eCLIP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms