RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 MFN1Q8IWA4 741 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 AHI1Q8N157 1196 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 FIBINQ8TAL6 211 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 WFDC5Q8TCV5 224 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 RNF34Q969K3 372 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 C18orf8Q96DM3 657 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 DLL3Q9NYJ7 618 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 COX16Q9P0S2 106 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 CDV3Q9UKY7 258 aaKnown RBP20.21■□□□□ 0.83
SREBF1-220ENST00000581707 PLA2G4CQ9UP65 541 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 GON4LQ3T8J9 2241 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 KCNU1A8MYU2 1149 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 SYNCRIPO60506 623 aaKnown RBP20.2■□□□□ 0.82
SREBF1-220ENST00000581707 ZNF217O75362 1048 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 CAVIN2O95810 425 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 ABCB4P21439 1286 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 CCR1P32246 355 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 CD70P32970 193 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 NOS2P35228 1153 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 SOX5P35711 763 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 SF3A2Q15428 464 aaKnown RBP20.2■□□□□ 0.82
SREBF1-220ENST00000581707 FUT11Q495W5 492 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 RAP1GAP2Q684P5 730 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 SERPINA13PQ6UXR4 307 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 CHSY1Q86X52 802 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 ZNF677Q86XU0 584 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 CCDC117Q8IWD4 279 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-220ENST00000581707 LGI2Q8N0V4 545 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 CFAP52Q8N1V2 620 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 C12orf50Q8NA57 414 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-220ENST00000581707 NEK11Q8NG66 645 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 MRGPRX1Q96LB2 322 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 SPAG5Q96R06 1193 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 SLC6A17Q9H1V8 727 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 VPS45Q9NRW7 570 aa20.2■□□□□ 0.82
SREBF1-220ENST00000581707 DNAH14Q0VDD8 3507 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-220ENST00000581707 FAM170AA1A519 330 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 ATP5BP06576 529 aaKnown RBP20.19■□□□□ 0.82
SREBF1-220ENST00000581707 ATP1A3P13637 1013 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 POLR2EP19388 210 aaKnown RBP20.19■□□□□ 0.82
SREBF1-220ENST00000581707 TACR2P21452 398 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 PRKCHP24723 683 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 STAT1P42224 750 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 MATKP42679 507 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 DHPSP49366 369 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-220ENST00000581707 RNASE9P60153 205 aaKnown RBP20.19■□□□□ 0.82
SREBF1-220ENST00000581707 NME3Q13232 169 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 FNDC3BQ53EP0 1204 aaKnown RBP20.19■□□□□ 0.82
SREBF1-220ENST00000581707 MBLAC2Q68D91 279 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 KIAA1324Q6UXG2 1013 aaKnown RBP20.19■□□□□ 0.82
SREBF1-220ENST00000581707 SLC36A4Q6YBV0 504 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 APTXQ7Z2E3 356 aaKnown RBP20.19■□□□□ 0.82
SREBF1-220ENST00000581707 TMEFF1Q8IYR6 380 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 CARNMT1Q8N4J0 409 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 MSANTD4Q8NCY6 345 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 CYB5D2Q8WUJ1 264 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 SLC20A1Q8WUM9 679 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 CPA5Q8WXQ8 436 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 ERGIC2Q96RQ1 377 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 BPIFA3Q9BQP9 254 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 SMOC1Q9H4F8 434 aa20.19■□□□□ 0.82
SREBF1-220ENST00000581707 NOCTQ9UK39 431 aaKnown RBP20.19■□□□□ 0.82
SREBF1-220ENST00000581707 CEP192Q8TEP8 1941 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 F5H5T6 163 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 M0QYT0 321 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 GDF9O60383 454 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 DLDP09622 509 aaKnown RBP20.18■□□□□ 0.82
SREBF1-220ENST00000581707 SCNN1AP37088 669 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 NOMO3P69849 1222 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 CDR2Q01850 454 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 MTA1Q13330 715 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 CDH18Q13634 790 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 AASDHQ4L235 1098 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-220ENST00000581707 SPDYCQ5MJ68 293 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 NAA35Q5VZE5 725 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 CYP2U1Q7Z449 544 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 XYLT1Q86Y38 959 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 NETO1Q8TDF5 533 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 LMLNQ96KR4 655 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 PRDM16Q9HAZ2 1276 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 RRN3Q9NYV6 651 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.18■□□□□ 0.82
SREBF1-220ENST00000581707 CYP8B1Q9UNU6 501 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 CKAP5Q14008 2032 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 CACNA1AO00555 2505 aa20.18■□□□□ 0.82
SREBF1-220ENST00000581707 IGHV1OR15-9A0A0B4J2B8 117 aa20.17■□□□□ 0.82
SREBF1-220ENST00000581707 SMTNL1A8MU46 457 aa20.17■□□□□ 0.82
SREBF1-220ENST00000581707 LUC7L3O95232 432 aaKnown RBP20.17■□□□□ 0.82
SREBF1-220ENST00000581707 EPHX1P07099 455 aa20.17■□□□□ 0.82
SREBF1-220ENST00000581707 HLA-EP13747 358 aa20.17■□□□□ 0.82
SREBF1-220ENST00000581707 CHRNB2P17787 502 aa20.17■□□□□ 0.82
SREBF1-220ENST00000581707 RPL6Q02878 288 aaKnown RBP20.17■□□□□ 0.82
SREBF1-220ENST00000581707 LMAN2Q12907 356 aa20.17■□□□□ 0.82
SREBF1-220ENST00000581707 C2CD6Q53TS8 623 aa20.17■□□□□ 0.82
SREBF1-220ENST00000581707 FAM102AQ5T9C2 384 aaPredicted RBP20.17■□□□□ 0.82
SREBF1-220ENST00000581707 TMPRSS6Q8IU80 811 aa20.17■□□□□ 0.82
SREBF1-220ENST00000581707 DHX40Q8IX18 779 aaKnown RBP20.17■□□□□ 0.82
SREBF1-220ENST00000581707 NPY6RQ99463 290 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms