RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 GBP6Q6ZN66 633 aa21.72■■□□□ 1.07
CCDC42-203ENST00000581598 IRF2BP1Q8IU81 584 aa21.72■■□□□ 1.07
CCDC42-203ENST00000581598 HJURPQ8NCD3 748 aaPredicted RBP21.72■■□□□ 1.07
CCDC42-203ENST00000581598 OR2T3Q8NH03 318 aa21.72■■□□□ 1.07
CCDC42-203ENST00000581598 FAM149B1Q96BN6 582 aa21.72■■□□□ 1.07
CCDC42-203ENST00000581598 LMLNQ96KR4 655 aa21.72■■□□□ 1.07
CCDC42-203ENST00000581598 CRACR2AQ9BSW2 395 aa21.72■■□□□ 1.07
CCDC42-203ENST00000581598 APEX2Q9UBZ4 518 aa21.72■■□□□ 1.07
CCDC42-203ENST00000581598 NAALADL1Q9UQQ1 740 aa21.72■■□□□ 1.07
CCDC42-203ENST00000581598 CHD8Q9HCK8 2581 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 GOLGA6L7A0A1B0GV03 622 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 BECN2A8MW95 431 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 ARHGAP33O14559 1287 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 GIPC1O14908 333 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 PAPSS1O43252 624 aaPredicted RBP21.71■■□□□ 1.07
CCDC42-203ENST00000581598 THAP12O43422 761 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 TBL1XO60907 577 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 ATP5BP06576 529 aaKnown RBP21.71■■□□□ 1.07
CCDC42-203ENST00000581598 SYPP08247 313 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 DLDP09622 509 aaKnown RBP21.71■■□□□ 1.07
CCDC42-203ENST00000581598 SLC9A1P19634 815 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 MAPK8P45983 427 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 ATXN3P54252 364 aaPredicted RBP21.71■■□□□ 1.07
CCDC42-203ENST00000581598 SEMA3BQ13214 749 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 EXOC3L4Q17RC7 722 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 MBLAC2Q68D91 279 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 GAS2L3Q86XJ1 694 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 FIBINQ8TAL6 211 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 WFDC5Q8TCV5 224 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 SHC3Q92529 594 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 NUP58Q9BVL2 599 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 NAT10Q9H0A0 1025 aaKnown RBP21.71■■□□□ 1.07
CCDC42-203ENST00000581598 PCED1AQ9H1Q7 454 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 CYTH4Q9UIA0 394 aa21.71■■□□□ 1.07
CCDC42-203ENST00000581598 TYW5A2RUC4 315 aaKnown RBP21.7■■□□□ 1.06
CCDC42-203ENST00000581598 E5RJQ4 531 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 IGLV3-25P01717 112 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 ACADMP11310 421 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 GNSP15586 552 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 ZNF165P49910 485 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 ZNF252P-AS1Q0IIN9 211 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 FNDC3BQ53EP0 1204 aaKnown RBP21.7■■□□□ 1.06
CCDC42-203ENST00000581598 PIP4P1Q86T03 277 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 TAC4Q86UU9 113 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 RGL4Q8IZJ4 473 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 CYB5D2Q8WUJ1 264 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 TTC17Q96AE7 1141 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 PRICKLE1Q96MT3 831 aaPredicted RBP21.7■■□□□ 1.06
CCDC42-203ENST00000581598 THAP9Q9H5L6 903 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 POPDC2Q9HBU9 364 aa21.7■■□□□ 1.06
CCDC42-203ENST00000581598 DNAAF2Q9NVR5 837 aaKnown RBP21.7■■□□□ 1.06
CCDC42-203ENST00000581598 MAP1BP46821 2468 aaKnown RBP21.7■■□□□ 1.06
CCDC42-203ENST00000581598 CAPN9O14815 690 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 HLA-EP13747 358 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 POLR2EP19388 210 aaKnown RBP21.69■■□□□ 1.06
CCDC42-203ENST00000581598 PON1P27169 355 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 CD70P32970 193 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 YWHAZP63104 245 aaKnown RBP21.69■■□□□ 1.06
CCDC42-203ENST00000581598 ZBTB16Q05516 673 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 EIF4EBP2Q13542 120 aaPredicted RBP21.69■■□□□ 1.06
CCDC42-203ENST00000581598 IQCB1Q15051 598 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 MS4A13Q5J8X5 152 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 SYPL2Q5VXT5 272 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 GJB7Q6PEY0 223 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 MFN1Q8IWA4 741 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 HDDC3Q8N4P3 179 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 GPR174Q9BXC1 333 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 SLC32A1Q9H598 525 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 ACP6Q9NPH0 428 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 SUN2Q9UH99 717 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 PCDHGC3Q9UN70 934 aa21.69■■□□□ 1.06
CCDC42-203ENST00000581598 METTL12A8MUP2 240 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 OPHN1O60890 802 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 ASLP04424 464 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 GLI1P08151 1106 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 PDCLQ13371 301 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 ARHGAP44Q17R89 818 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 PLEKHG6Q3KR16 790 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 CREBRFQ8IUR6 639 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 MINDY1Q8N5J2 469 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 KDM1BQ8NB78 822 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 DEFB124Q8NES8 71 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 ENOX1Q8TC92 643 aaKnown RBP21.68■■□□□ 1.06
CCDC42-203ENST00000581598 GTPBP2Q9BX10 602 aaKnown RBP21.68■■□□□ 1.06
CCDC42-203ENST00000581598 ZDHHC5Q9C0B5 715 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 NUCKS1Q9H1E3 243 aaKnown RBP21.68■■□□□ 1.06
CCDC42-203ENST00000581598 LHX5Q9H2C1 402 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 CBX8Q9HC52 389 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 FSCN3Q9NQT6 498 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 ASNSD1Q9NWL6 643 aa21.68■■□□□ 1.06
CCDC42-203ENST00000581598 A0A1B0GTW7 788 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 MEI4A8MW99 385 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 TRUB2O95900 331 aaKnown RBP21.67■■□□□ 1.06
CCDC42-203ENST00000581598 APOEP02649 317 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 PRKCSHP14314 528 aaPredicted RBP21.67■■□□□ 1.06
CCDC42-203ENST00000581598 MTIF2P46199 727 aaKnown RBP21.67■■□□□ 1.06
CCDC42-203ENST00000581598 RPS24P62847 133 aaKnown RBP21.67■■□□□ 1.06
CCDC42-203ENST00000581598 SLC14A1Q13336 389 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 MAN2A1Q16706 1144 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 DCAF12L1Q5VU92 463 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms