RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CFHR3Q02985 330 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 SMAD1Q15797 465 aaKnown RBP5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 FAM110CQ1W6H9 321 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 LRRC24Q50LG9 513 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D3GQ6DHY5 549 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 DGAT2L7PQ6IED9 249 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D3CQ6IPX1 549 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 MMS22LQ6ZRQ5 1243 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 ZNF804AQ7Z570 1209 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D3Q8IZP1 549 aaPredicted RBP5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 OR52L2PQ8NGH6 319 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 CEP70Q8NHQ1 597 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 ASB12Q8WXK4 309 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 USP13Q92995 863 aaPredicted RBP5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TRMT61AQ96FX7 289 aaKnown RBP5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 ELOVL1Q9BW60 279 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 ABHD16BQ9H3Z7 469 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 CDCP1Q9H5V8 836 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 G6PC2Q9NQR9 355 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 FLRT1Q9NZU1 646 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 ADAM21Q9UKJ8 722 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 FZD4Q9ULV1 537 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 LZTS1Q9Y250 596 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 ZNF804BA4D1E1 1349 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 AOX1Q06278 1338 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 FAM90A20PA6NIJ5 464 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 CLIC1O00299 241 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 SH3BP5O60239 455 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 HEXIM1O94992 359 aaKnown RBP5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 MT-CO3P00414 261 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 ITGB6P18564 788 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 CERS1P27544 350 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 DUSP1P28562 367 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 EPHB2P29323 1055 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 GRK5P34947 590 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 PTGER1P34995 402 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 FOXL2P58012 376 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 TUBA4AP68366 448 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 HOXA4Q00056 320 aaPredicted RBP5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 POU5F1BQ06416 359 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 MFSD13AQ14CX5 517 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 TBRG1Q3YBR2 411 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 ZNF626Q68DY1 528 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 CCDC70Q6NSX1 233 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 SERPINA13PQ6UXR4 307 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 KYAT3Q6YP21 454 aaKnown RBP5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 ZNF782Q6ZMW2 699 aaPredicted RBP5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 CNGA4Q8IV77 575 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 CPOQ8IVL8 374 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 LINC01465Q8N7H1 131 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 DENND1AQ8TEH3 1009 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 GLMPQ8WWB7 406 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 DAZAP1Q96EP5 407 aaKnown RBP5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 NAP1L4Q99733 375 aaKnown RBP5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 ASIC5Q9NY37 505 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 GGA3Q9NZ52 723 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 DERAQ9Y315 318 aa5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 SETD1BQ9UPS6 1966 aaKnown RBP5.27□□□□□ -1.57
SMCHD1-205ENST00000581383 KRTAP29-1A8MX34 341 aaPredicted RBP5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 STX16-NPEPL1H3BU86 382 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 STX16O14662 325 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 GCATO75600 419 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 MATN1P21941 496 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 AGTR2P50052 363 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 TAS2R50P59544 299 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 WDR5P61964 334 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 SLC12A1Q13621 1099 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 WDR93Q6P2C0 686 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 TMEM65Q6PI78 240 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 TRIM72Q6ZMU5 477 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 RINLQ6ZS11 566 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 ANKS1BQ7Z6G8 1248 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 YTHDF3Q7Z739 585 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 LRRTM4Q86VH4 590 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 CLEC4CQ8WTT0 213 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 AKAP1Q92667 903 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 RPL36ALQ969Q0 106 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 KAZALD1Q96I82 304 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 MAELQ96JY0 434 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 TBATAQ96M53 351 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 C1QTNF7Q9BXJ2 289 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 ADGRE3Q9BY15 652 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 RMI1Q9H9A7 625 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 PLEKHA2Q9HB19 425 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 RCE1Q9Y256 329 aa5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 RRP7AQ9Y3A4 280 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 HEMK1Q9Y5R4 338 aaPredicted RBP5.26□□□□□ -1.57
SMCHD1-205ENST00000581383 MBD3L5A6NJ08 208 aaPredicted RBP5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 PROB1E7EW31 1015 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 TFRCP02786 760 aaKnown RBP5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 SLC3A2P08195 630 aaKnown RBP5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 CYP3A4P08684 503 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 ATF7P17544 494 aaPredicted RBP5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 MMP13P45452 471 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 RCAN1P53805 252 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 GAB1Q13480 694 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 EFR3AQ14156 821 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 DCTN1Q14203 1278 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 PRAMEF17Q5VTA0 474 aa5.25□□□□□ -1.57
SMCHD1-205ENST00000581383 ZNF425Q6IV72 752 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms