RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 TRUB2O95900 331 aaKnown RBP22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 DLDP09622 509 aaKnown RBP22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 MAOBP27338 520 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 ERCC5P28715 1186 aaPredicted RBP22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 NOVA1P51513 510 aaKnown RBP22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 PITX1P78337 314 aaPredicted RBP22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 PTK2Q05397 1052 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 NUMA1Q14980 2115 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 VWA3BQ502W6 1294 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 ZC3H12AQ5D1E8 599 aaKnown RBP22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 MS4A13Q5J8X5 152 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 MIIPQ5JXC2 388 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 SH3PXD2AQ5TCZ1 1133 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 MFN1Q8IWA4 741 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 FAM114A1Q8IWE2 563 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 CFAP52Q8N1V2 620 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 FIBINQ8TAL6 211 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 FOXJ1Q92949 421 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 LMLNQ96KR4 655 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 CPXM1Q96SM3 734 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 TUBGCP2Q9BSJ2 902 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 GPR174Q9BXC1 333 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 NDST4Q9H3R1 872 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 CAPN10Q9HC96 672 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 PCDHGC3Q9UN70 934 aa22.08■■□□□ 1.13
CSNK1D-216ENST00000581108 PCDH15Q96QU1 1955 aa22.08■■□□□ 1.12
CSNK1D-216ENST00000581108 ATP5BP06576 529 aaKnown RBP22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 PNMA6AP0CW24 399 aaPredicted RBP22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 ACADMP11310 421 aa22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 PRKCSHP14314 528 aaPredicted RBP22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 POLR2EP19388 210 aaKnown RBP22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 CLCN1P35523 988 aa22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 GFPT1Q06210 699 aaPredicted RBP22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 DCAF6Q58WW2 860 aa22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 SYCP2LQ5T4T6 812 aa22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 DPY19L2P1Q6NXN4 242 aa22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 CARNMT1Q8N4J0 409 aa22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 OR2T3Q8NH03 318 aa22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 PPP1R13BQ96KQ4 1090 aa22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 GTPBP2Q9BX10 602 aaKnown RBP22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 CACNA1EQ15878 2313 aa22.07■■□□□ 1.12
CSNK1D-216ENST00000581108 PCNX2A6NKB5 2137 aa22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 IGLV3-25P01717 112 aa22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 APOEP02649 317 aa22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 OXTRP30559 389 aa22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 EIF4EBP2Q13542 120 aaPredicted RBP22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 FSCBQ5H9T9 825 aa22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 RAP1GAP2Q684P5 730 aa22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 RABEPKQ7Z6M1 372 aa22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 SLC47A2Q86VL8 602 aa22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 ZNF557Q8N988 423 aaPredicted RBP22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 LHX5Q9H2C1 402 aa22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 PRSS16Q9NQE7 514 aa22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 SAMSN1Q9NSI8 373 aaKnown RBP22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 DACH1Q9UI36 760 aa22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 INTS6Q9UL03 887 aaKnown RBP22.06■■□□□ 1.12
CSNK1D-216ENST00000581108 TYW5A2RUC4 315 aaKnown RBP22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 GRAP2O75791 330 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 IGLV3-19P01714 112 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 PMLP29590 882 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 KRT9P35527 623 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 ATXN3P54252 364 aaPredicted RBP22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 KCNMA1Q12791 1236 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 WDR45BQ5MNZ6 344 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 MMS22LQ6ZRQ5 1243 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 FAM124AQ86V42 546 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 LGI2Q8N0V4 545 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 DEFB106AQ8N104 65 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 C1orf131Q8NDD1 294 aaKnown RBP22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 CADM4Q8NFZ8 388 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 OR2I1PQ8NGU4 316 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 TTC17Q96AE7 1141 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 BTN2A3PQ96KV6 586 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 NUP58Q9BVL2 599 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 MTG2Q9H4K7 406 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 PLCB1Q9NQ66 1216 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 LMBRD1Q9NUN5 540 aa22.05■■□□□ 1.12
CSNK1D-216ENST00000581108 EPG5Q9HCE0 2579 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 MEI4A8MW99 385 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 ARHGAP33O14559 1287 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 CSRP1P21291 193 aaKnown RBP22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 TACR2P21452 398 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 CDH18Q13634 790 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 PLEKHG6Q3KR16 790 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 EFHC1Q5JVL4 640 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 OR6B2Q6IFH4 312 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 CLEC17AQ6ZS10 378 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 FAM183BPQ6ZVS7 135 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 FAM71AQ8IYT1 594 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 DEFB124Q8NES8 71 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 DNASE2BQ8WZ79 361 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 SLC2A13Q96QE2 648 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 FAM204AQ9H8W3 233 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 SUN2Q9UH99 717 aa22.04■■□□□ 1.12
CSNK1D-216ENST00000581108 SYNJ2BP-COX16A0A087WUM0 186 aa22.03■■□□□ 1.12
CSNK1D-216ENST00000581108 METTL12A8MUP2 240 aa22.03■■□□□ 1.12
CSNK1D-216ENST00000581108 KCNU1A8MYU2 1149 aa22.03■■□□□ 1.12
CSNK1D-216ENST00000581108 PES1O00541 588 aaKnown RBP22.03■■□□□ 1.12
CSNK1D-216ENST00000581108 LUC7L3O95232 432 aaKnown RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms