RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 HAPLN3Q96S86 360 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 TBCBQ99426 244 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 PRMT1Q99873 361 aaKnown RBP16.99■□□□□ 0.31
IFT20-210ENST00000580357 METTL5Q9NRN9 209 aaKnown RBP16.99■□□□□ 0.31
IFT20-210ENST00000580357 PIGVQ9NUD9 493 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 C2orf42Q9NWW7 574 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 STIM2Q9P246 746 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 PLA2G4CQ9UP65 541 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 R4GN57 208 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 AXIN1O15169 862 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 RTN2O75298 545 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 MOCS3O95396 460 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 SERPING1P05155 500 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 RDXP35241 583 aaKnown RBP16.98■□□□□ 0.31
IFT20-210ENST00000580357 PTPN9P43378 593 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 FNTBP49356 437 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 GEN1Q17RS7 908 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 TSR1Q2NL82 804 aaKnown RBP16.98■□□□□ 0.31
IFT20-210ENST00000580357 ARL13BQ3SXY8 428 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 LRRC31Q6UY01 552 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 STRADAQ7RTN6 431 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 ZNF571Q7Z3V5 609 aaPredicted RBP16.98■□□□□ 0.31
IFT20-210ENST00000580357 BNIPLQ7Z465 357 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 MFN1Q8IWA4 741 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 SFTPA1Q8IWL2 248 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 CHPFQ8IZ52 775 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 RNF214Q8ND24 703 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 RXFP2Q8WXD0 754 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 TRIM11Q96F44 468 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 P2RY11Q96G91 374 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 CFAP57Q96MR6 1250 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 ANP32EQ9BTT0 268 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 TKTL2Q9H0I9 626 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 PARVAQ9NVD7 372 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 KIAA1522Q9P206 1035 aaPredicted RBP16.98■□□□□ 0.31
IFT20-210ENST00000580357 THAP10Q9P2Z0 257 aaPredicted RBP16.98■□□□□ 0.31
IFT20-210ENST00000580357 GGA2Q9UJY4 613 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 RAB23Q9ULC3 237 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 CFAP54Q96N23 3096 aa16.98■□□□□ 0.31
IFT20-210ENST00000580357 ZFHX2Q9C0A1 2572 aaPredicted RBP16.98■□□□□ 0.31
IFT20-210ENST00000580357 C2CD4BA6NLJ0 364 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 H0Y626 953 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 SGK1O00141 431 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 FTLP02792 175 aaPredicted RBP16.97■□□□□ 0.31
IFT20-210ENST00000580357 CHRM1P11229 460 aaPredicted RBP16.97■□□□□ 0.31
IFT20-210ENST00000580357 PABPC1P11940 636 aaKnown RBP16.97■□□□□ 0.31
IFT20-210ENST00000580357 POLR2EP19388 210 aaKnown RBP16.97■□□□□ 0.31
IFT20-210ENST00000580357 RPS24P62847 133 aaKnown RBP16.97■□□□□ 0.31
IFT20-210ENST00000580357 CDH18Q13634 790 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 AUHQ13825 339 aaKnown RBP16.97■□□□□ 0.31
IFT20-210ENST00000580357 BYSLQ13895 437 aaKnown RBP16.97■□□□□ 0.31
IFT20-210ENST00000580357 CCDC14Q49A88 953 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 HEATR6Q6AI08 1181 aaKnown RBP16.97■□□□□ 0.31
IFT20-210ENST00000580357 DNAJC24Q6P3W2 148 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 CARNMT1Q8N4J0 409 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 CENPIQ92674 756 aaPredicted RBP16.97■□□□□ 0.31
IFT20-210ENST00000580357 GABRG3Q99928 467 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 CIPCQ9C0C6 399 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 EPC1Q9H2F5 836 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 RETREG1Q9H6L5 497 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 ABCB8Q9NUT2 735 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 XPO7Q9UIA9 1087 aaKnown RBP16.97■□□□□ 0.31
IFT20-210ENST00000580357 CLEC4EQ9ULY5 219 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 ATG2BQ96BY7 2078 aa16.97■□□□□ 0.31
IFT20-210ENST00000580357 USP34Q70CQ2 3546 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 ADAM23O75077 832 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 PAGE1O75459 146 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 LUC7L3O95232 432 aaKnown RBP16.96■□□□□ 0.31
IFT20-210ENST00000580357 ADCY5O95622 1261 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 ASLP04424 464 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 MYBL1P10243 752 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 SKILP12757 684 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 GPD1P21695 349 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 HLA-FP30511 346 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 HNRNPH3P31942 346 aaKnown RBP16.96■□□□□ 0.31
IFT20-210ENST00000580357 RFC1P35251 1148 aaPredicted RBP16.96■□□□□ 0.31
IFT20-210ENST00000580357 SGSHP51688 502 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 ENPP2Q13822 863 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 C5orf22Q49AR2 442 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 USP39Q53GS9 565 aaKnown RBP16.96■□□□□ 0.31
IFT20-210ENST00000580357 TDRD12Q587J7 1177 aaKnown RBP16.96■□□□□ 0.31
IFT20-210ENST00000580357 EGFLAMQ63HQ2 1017 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 FBXL22Q6P050 247 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 DCUN1D2Q6PH85 259 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 WDR59Q6PJI9 974 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 CHST9Q7L1S5 443 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 PHLDB2Q86SQ0 1253 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 C11orf74Q86VG3 221 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 RASSF3Q86WH2 238 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 OR8K1Q8NGG5 319 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 PRICKLE1Q96MT3 831 aaPredicted RBP16.96■□□□□ 0.31
IFT20-210ENST00000580357 RPRD1AQ96P16 312 aaPredicted RBP16.96■□□□□ 0.31
IFT20-210ENST00000580357 HHIPQ96QV1 700 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 SIK2Q9H0K1 926 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 ZNHIT6Q9NWK9 470 aaKnown RBP16.96■□□□□ 0.31
IFT20-210ENST00000580357 HS3ST4Q9Y661 456 aa16.96■□□□□ 0.31
IFT20-210ENST00000580357 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.95■□□□□ 0.3
IFT20-210ENST00000580357 A0A1B0GVM2 712 aa16.95■□□□□ 0.3
IFT20-210ENST00000580357 TCRBV5S1A1TA0A578 114 aa16.95■□□□□ 0.3
IFT20-210ENST00000580357 TCAF2A6NFQ2 919 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms