RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 TAX1BP1Q86VP1 789 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CCDC13Q8IYE1 715 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ACTL9Q8TC94 416 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 RBM15Q96T37 977 aaKnown RBP eCLIP13.1□□□□□ -0.311e-6■■■□□ 17.1
CDK5RAP3-217ENST00000580287 MRPL17Q9NRX2 175 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 XPO7Q9UIA9 1087 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 NEU2Q9Y3R4 380 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 NR2E3Q9Y5X4 410 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 HIDE1A8MVS5 230 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 GOLGA8MH3BSY2 632 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 DRD4P21917 467 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CTNNB1P35222 781 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 VCPP55072 806 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 SHHQ15465 462 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 C6orf89Q6UWU4 347 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 MIB1Q86YT6 1006 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 LRRC34Q8IZ02 419 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ALLCQ8N6M5 410 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 PQLC3Q8N755 202 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 RNF34Q969K3 372 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 MRRFQ96E11 262 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 STMN4Q9H169 189 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 SAYSD1Q9NPB0 183 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 KLC4Q9NSK0 619 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 NINJ2Q9NZG7 142 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 FZD10Q9ULW2 581 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 HEY1Q9Y5J3 304 aa13.1□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CHUKO15111 745 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 RASSF9O75901 435 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ENDOD1O94919 500 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ABLIM3O94929 683 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CXCL14O95715 111 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 AGTP01019 485 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 AMPD1P23109 780 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ANKRD20A8PQ5CZ79 823 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CROCCP2Q86T23 111 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ZC3H18Q86VM9 953 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CYP4X1Q8N118 509 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ANKRD42Q8N9B4 389 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ATXN2LQ8WWM7 1075 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CLP1Q92989 425 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ABHD8Q96I13 439 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 HTATIP2Q9BUP3 242 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 MAK16Q9BXY0 300 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 TKTL2Q9H0I9 626 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 SIK2Q9H0K1 926 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CNOT10Q9H9A5 744 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 SCML2Q9UQR0 700 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 PTPRDP23468 1912 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 SLC38A8A6NNN8 435 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 MOCS2O96007 188 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 DESP17661 470 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ADRA1BP35368 520 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 MMP13P45452 471 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 EXOC3L1Q86VI1 746 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 TP53INP2Q8IXH6 220 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 RSAD2Q8WXG1 361 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 IRGQQ8WZA9 623 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 RNF157Q96PX1 679 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 HERC2P3Q9BVR0 1158 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 WDCPQ9H6R7 721 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ABCC13Q9NSE7 274 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 INTS9Q9NV88 658 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 GGA2Q9UJY4 613 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 TRANK1O15050 2925 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 GOLGA6L7A0A1B0GV03 622 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 LINC01553A4QN01 128 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 DNALI1O14645 258 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 LILRB3O75022 631 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 HMBSP08397 361 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 VIMP08670 466 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 PBX2P40425 430 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 MAGEA10P43363 369 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 EFEMP1Q12805 493 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 MPP2Q14168 576 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 TAZQ16635 292 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 PLPP4Q5VZY2 271 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 HIBCHQ6NVY1 386 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 MON1AQ86VX9 555 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 GDAP1Q8TB36 358 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CCHCR1Q8TD31 782 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CHMP6Q96FZ7 201 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ELAC2Q9BQ52 826 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 TCF25Q9BQ70 676 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ZBP1Q9H171 429 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 SLC40A1Q9NP59 571 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 DONSONQ9NYP3 566 aa13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 AFF4Q9UHB7 1163 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-217ENST00000580287 PRRG1O14668 218 aa13.08□□□□□ -0.32
CDK5RAP3-217ENST00000580287 CA3P07451 260 aa13.08□□□□□ -0.32
CDK5RAP3-217ENST00000580287 IRS1P35568 1242 aa13.08□□□□□ -0.32
CDK5RAP3-217ENST00000580287 BMPR1AP36894 532 aa13.08□□□□□ -0.32
CDK5RAP3-217ENST00000580287 MAGEA4P43358 317 aa13.08□□□□□ -0.32
CDK5RAP3-217ENST00000580287 GBE1Q04446 702 aa13.08□□□□□ -0.32
CDK5RAP3-217ENST00000580287 TWF1Q12792 350 aa13.08□□□□□ -0.32
CDK5RAP3-217ENST00000580287 OASLQ15646 514 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-217ENST00000580287 DPYSL2Q16555 572 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms