RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TMEM30AQ9NV96 361 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 MTO1Q9Y2Z2 717 aaKnown RBP10.79□□□□□ -0.68
TOP3A-209ENST00000580095 HUS1O60921 280 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 TSHRP16473 764 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 TPH1P17752 444 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 CACNA2D1P54289 1103 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 LILRA4P59901 499 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 PDE1BQ01064 536 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 PEX6Q13608 980 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 PAN2Q504Q3 1202 aaKnown RBP10.79□□□□□ -0.68
TOP3A-209ENST00000580095 FASTKD1Q53R41 847 aaKnown RBP10.79□□□□□ -0.68
TOP3A-209ENST00000580095 LGSNQ5TDP6 509 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 GPRIN1Q7Z2K8 1008 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 PID1Q7Z2X4 250 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 ZNF410Q86VK4 478 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 POU5F2Q8N7G0 328 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 OR52K1Q8NGK4 314 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 SLC7A14Q8TBB6 771 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 CENPIQ92674 756 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-209ENST00000580095 SAR1AQ9NR31 198 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.79□□□□□ -0.68
TOP3A-209ENST00000580095 PCDHA11Q9Y5I1 949 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 USP3Q9Y6I4 520 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 A0A0A0MRY4 1105 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 PRR5-ARHGAP8B1AHC4 643 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 PIRO00625 290 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 TRDMT1O14717 391 aaKnown RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 STAU1O95793 577 aaKnown RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 MATKP42679 507 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 MAGEA8P43361 318 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 ARHGAP8P85298 464 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 OCRLQ01968 901 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 PDE1CQ14123 709 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 SNX17Q15036 470 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 DLG2Q15700 870 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 KYAT1Q16773 422 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 TEX44Q53QW1 395 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 TWF2Q6IBS0 349 aaKnown RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 ALKAL1Q6UXT8 129 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 ZNF567Q8N184 647 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 LRRC52Q8N7C0 313 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 RBM15BQ8NDT2 890 aaKnown RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 MCUQ8NE86 351 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 SHCBP1Q8NEM2 672 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 ARNTL2Q8WYA1 636 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 MS4A4AQ96JQ5 239 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 SPATA13Q96N96 652 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 AGAP2Q99490 1192 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 XPNPEP3Q9NQH7 507 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 EMCNQ9ULC0 261 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 FZD10Q9ULW2 581 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 UBQLN1Q9UMX0 589 aaKnown RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 WASF2Q9Y6W5 498 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 TRAFD1O14545 582 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 BPGMP07738 259 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 SAT1P21673 171 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 ARRB2P32121 409 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 PGM1P36871 562 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 WASHC5Q12768 1159 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 STX3Q13277 289 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 SEMA5AQ13591 1074 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 THOC5Q13769 683 aaKnown RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 CCDC6Q16204 474 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 PDCD2Q16342 344 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 CCL14Q16627 93 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 ARHGAP17Q68EM7 881 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 PAQR9Q6ZVX9 377 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 TEX9Q8N6V9 391 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 EFCAB3Q8N7B9 438 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 ZNF398Q8TD17 642 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 LPPQ93052 612 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 PPP1R36Q96LQ0 422 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 ZNF778Q96MU6 729 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 FAM161BQ96MY7 647 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 FCRL3Q96P31 734 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 TSPAN18Q96SJ8 248 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 OXCT2Q9BYC2 517 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 CAB39LQ9H9S4 337 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 PLEKHA5Q9HAU0 1116 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 MOCS1Q9NZB8 636 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 SIRPGQ9P1W8 387 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 CPA4Q9UI42 421 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 LNPEPQ9UIQ6 1025 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 YJEFN3A6XGL0 299 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 E7ENQ6 273 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 DGKIO75912 1065 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 GSRP00390 522 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 SETSIPP0DME0 302 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 MAGEA6P43360 314 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 NUMBP49757 651 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 TAF6P49848 677 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 TKTL1P51854 596 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 SLC25A52Q3SY17 297 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 OLFML2BQ68BL8 750 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 PACS1Q6VY07 963 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 UNC93AQ86WB7 457 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 TTC39CQ8N584 583 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 NRG4Q8WWG1 115 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 NAF1Q96HR8 494 aaKnown RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 OLFM3Q96PB7 478 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 288.1 ms