RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 MRRFQ96E11 262 aaKnown RBP28.51■■■□□ 2.15
LIMD2-203ENST00000578067 DHRS4Q9BTZ2 278 aa28.51■■■□□ 2.15
LIMD2-203ENST00000578067 BRD8Q9H0E9 1235 aa28.51■■■□□ 2.15
LIMD2-203ENST00000578067 VWA8A3KMH1 1905 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 TTC3P53804 2025 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 CCR1P32246 355 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 SERPINB6P35237 376 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 CDK16Q00536 496 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 FAAP100Q0VG06 881 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 EFTUD2Q15029 972 aaKnown RBP eCLIP28.5■■■□□ 2.153e-6■■■■■ 27.7
LIMD2-203ENST00000578067 ZNF534Q76KX8 674 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 ATAD1Q8NBU5 361 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 CYTH2Q99418 400 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 BEGAINQ9BUH8 593 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 PPP1R12CQ9BZL4 782 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 XAB2Q9HCS7 855 aaKnown RBP28.5■■■□□ 2.15
LIMD2-203ENST00000578067 ARPP19P56211 112 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 SARNPP82979 210 aaKnown RBP28.5■■■□□ 2.15
LIMD2-203ENST00000578067 PKN2Q16513 984 aaKnown RBP28.5■■■□□ 2.15
LIMD2-203ENST00000578067 STKLD1Q8NE28 680 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 PAFAH2Q99487 392 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 TET1Q8NFU7 2136 aa28.5■■■□□ 2.15
LIMD2-203ENST00000578067 NT5C1B-RDH14C9J2C7 533 aa28.49■■■□□ 2.15
LIMD2-203ENST00000578067 KRT15P19012 456 aa28.49■■■□□ 2.15
LIMD2-203ENST00000578067 MX2P20592 715 aa28.49■■■□□ 2.15
LIMD2-203ENST00000578067 PPIDQ08752 370 aaKnown RBP28.49■■■□□ 2.15
LIMD2-203ENST00000578067 PARP6Q2NL67 630 aa28.49■■■□□ 2.15
LIMD2-203ENST00000578067 ADGRD1Q6QNK2 874 aa28.49■■■□□ 2.15
LIMD2-203ENST00000578067 ZNF567Q8N184 647 aa28.49■■■□□ 2.15
LIMD2-203ENST00000578067 ARHGAP18Q8N392 663 aa28.49■■■□□ 2.15
LIMD2-203ENST00000578067 PRMT1Q99873 361 aaKnown RBP28.49■■■□□ 2.15
LIMD2-203ENST00000578067 FAM107BQ9H098 131 aa28.49■■■□□ 2.15
LIMD2-203ENST00000578067 CCDC134Q9H6E4 229 aa28.49■■■□□ 2.15
LIMD2-203ENST00000578067 SENP1Q9P0U3 644 aa28.49■■■□□ 2.15
LIMD2-203ENST00000578067 TCRBV9S1A1TA0A576 114 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 MSI1O43347 362 aaKnown RBP28.48■■■□□ 2.15
LIMD2-203ENST00000578067 CPB1P15086 417 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 MSH2P43246 934 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 PPP2R5DQ14738 602 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 TTC9BQ8N6N2 239 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 CHMP6Q96FZ7 201 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 CFAP36Q96G28 342 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 SIK2Q9H0K1 926 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 EIF2B3Q9NR50 452 aaKnown RBP28.48■■■□□ 2.15
LIMD2-203ENST00000578067 TMEM51Q9NW97 253 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 OSER1Q9NX31 292 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 IL37Q9NZH6 218 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 ZC3H7BQ9UGR2 993 aaKnown RBP28.48■■■□□ 2.15
LIMD2-203ENST00000578067 H7C4K7 107 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 GALNT2Q10471 571 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 GPR17Q13304 367 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 MPP2Q14168 576 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 DEFB128Q7Z7B8 93 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 HDAC11Q96DB2 347 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 CEP41Q9BYV8 373 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 TRABDQ9H4I3 376 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 NUDT5Q9UKK9 219 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 TANC1Q9C0D5 1861 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 SCN5AQ14524 2016 aa28.48■■■□□ 2.15
LIMD2-203ENST00000578067 EBAG9O00559 213 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 TBC1D4O60343 1298 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 PAGE1O75459 146 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 SRGAP2BP0DMP2 458 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 PBX3P40426 434 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 USP46P62068 366 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 TLE2Q04725 743 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 RTP2Q5QGT7 225 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 LRRC43Q8N309 656 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 ANKRD42Q8N9B4 389 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 SPPL2BQ8TCT7 592 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 MGARPQ8TDB4 240 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 SIGLEC10Q96LC7 697 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 TOX2Q96NM4 488 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 SERPINB11Q96P15 392 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 IGSF9Q9P2J2 1179 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 CPP00450 1065 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 GSTA2P09210 222 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 STX2P32856 288 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 HTR7P34969 479 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 SMARCB1Q12824 385 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 MSANTD2Q6P1R3 559 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 PID1Q7Z2X4 250 aa28.47■■■□□ 2.15
LIMD2-203ENST00000578067 MTMR11A4FU01 709 aa28.46■■■□□ 2.15
LIMD2-203ENST00000578067 KCNK1O00180 336 aa28.46■■■□□ 2.15
LIMD2-203ENST00000578067 MTSS1O43312 755 aa28.46■■■□□ 2.15
LIMD2-203ENST00000578067 MLNP12872 115 aa28.46■■■□□ 2.15
LIMD2-203ENST00000578067 GARSP41250 739 aaKnown RBP28.46■■■□□ 2.15
LIMD2-203ENST00000578067 MNX1P50219 401 aaPredicted RBP28.46■■■□□ 2.15
LIMD2-203ENST00000578067 TRIM60Q495X7 471 aa28.46■■■□□ 2.15
LIMD2-203ENST00000578067 RWDD4Q6NW29 188 aaKnown RBP28.46■■■□□ 2.15
LIMD2-203ENST00000578067 RSPO2Q6UXX9 243 aaPredicted RBP28.46■■■□□ 2.15
LIMD2-203ENST00000578067 ANKS3Q6ZW76 656 aa28.46■■■□□ 2.15
LIMD2-203ENST00000578067 TMEM173Q86WV6 379 aaPredicted RBP28.46■■■□□ 2.15
LIMD2-203ENST00000578067 DCAKDQ8WVC6 231 aa28.46■■■□□ 2.15
LIMD2-203ENST00000578067 DYDC1Q8WWB3 177 aa28.46■■■□□ 2.15
LIMD2-203ENST00000578067 ZNF317Q96PQ6 595 aaPredicted RBP28.46■■■□□ 2.15
LIMD2-203ENST00000578067 OXCT2Q9BYC2 517 aaPredicted RBP28.46■■■□□ 2.15
LIMD2-203ENST00000578067 NKIRAS1Q9NYS0 192 aa28.46■■■□□ 2.15
LIMD2-203ENST00000578067 PRDM4Q9UKN5 801 aa28.46■■■□□ 2.15
LIMD2-203ENST00000578067 MYO16Q9Y6X6 1858 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms