RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 CATSPERBQ9H7T0 1116 aa19.14■□□□□ 0.66
PRKCA-203ENST00000578063 XPO7Q9UIA9 1087 aaKnown RBP19.14■□□□□ 0.66
PRKCA-203ENST00000578063 NEU3Q9UQ49 428 aa19.14■□□□□ 0.66
PRKCA-203ENST00000578063 MFHAS1Q9Y4C4 1052 aa19.14■□□□□ 0.66
PRKCA-203ENST00000578063 E9PAM4 449 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 SEC31AO94979 1220 aaKnown RBP19.14■□□□□ 0.65
PRKCA-203ENST00000578063 IFNB1P01574 187 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 HMBSP08397 361 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 SRGAP2BP0DMP2 458 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 ITIH2P19823 946 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 ADCY8P40145 1251 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 PBX2P40425 430 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 SLC10A2Q12908 348 aaPredicted RBP19.14■□□□□ 0.65
PRKCA-203ENST00000578063 PDK1Q15118 436 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 SLC45A4Q5BKX6 768 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 RWDD4Q6NW29 188 aaKnown RBP19.14■□□□□ 0.65
PRKCA-203ENST00000578063 TMC8Q8IU68 726 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 LMAN2LQ9H0V9 348 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 MAN1C1Q9NR34 630 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 DPP7Q9UHL4 492 aa19.14■□□□□ 0.65
PRKCA-203ENST00000578063 GBF1Q92538 1859 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 H0YGN5 161 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 PPP1R12AO14974 1030 aaPredicted RBP19.13■□□□□ 0.65
PRKCA-203ENST00000578063 NCAM2O15394 837 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 CLASP2O75122 1294 aaKnown RBP19.13■□□□□ 0.65
PRKCA-203ENST00000578063 IVDP26440 423 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 CDC25CP30307 473 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 HOXA9P31269 272 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 GDF10P55107 478 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 MS4A13Q5J8X5 152 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 LRRC31Q6UY01 552 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 FAM71DQ8N9W8 422 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 MRPS31Q92665 395 aaKnown RBP19.13■□□□□ 0.65
PRKCA-203ENST00000578063 LRRC45Q96CN5 670 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 RTP4Q96DX8 246 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 GCNAQ96QF7 691 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 FMO2Q99518 471 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 LRRC3Q9BY71 257 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 ASAH2Q9NR71 780 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 ZDHHC18Q9NUE0 388 aa19.13■□□□□ 0.65
PRKCA-203ENST00000578063 MAP3K6O95382 1288 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 GABRR2P28476 465 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 HARS2P49590 506 aaKnown RBP19.12■□□□□ 0.65
PRKCA-203ENST00000578063 VPS41P49754 854 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 PLTPP55058 493 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 CAV1Q03135 178 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 PPP2R2DQ66LE6 453 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 ELMSAN1Q6PJG2 1045 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 ZDHHC24Q6UX98 284 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 GLIS1Q8NBF1 620 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 TFB1MQ8WVM0 346 aaKnown RBP19.12■□□□□ 0.65
PRKCA-203ENST00000578063 ART4Q93070 314 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 FERMT1Q9BQL6 677 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 NEUROG2Q9H2A3 272 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 C10orf88Q9H8K7 445 aa19.12■□□□□ 0.65
PRKCA-203ENST00000578063 PPARGC1AQ9UBK2 798 aaKnown RBP19.12■□□□□ 0.65
PRKCA-203ENST00000578063 MTRF1LQ9UGC7 380 aaKnown RBP19.12■□□□□ 0.65
PRKCA-203ENST00000578063 CEP290O15078 2479 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 C2orf78A6NCI8 922 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 CCL16O15467 120 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 KCNN4O15554 427 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 FGF19O95750 216 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 OLFM2O95897 454 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 HNRNPA1P09651 372 aaKnown RBP eCLIP19.11■□□□□ 0.65
PRKCA-203ENST00000578063 MX2P20592 715 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 RBL1P28749 1068 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 ACTN2P35609 894 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 TNNT3P45378 269 aaPredicted RBP19.11■□□□□ 0.65
PRKCA-203ENST00000578063 AUHQ13825 339 aaKnown RBP19.11■□□□□ 0.65
PRKCA-203ENST00000578063 LZTR1Q8N653 840 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 SLC22A17Q8WUG5 538 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 AZIN2Q96A70 460 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 BRD8Q9H0E9 1235 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 NKX2-4Q9H2Z4 354 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 USP29Q9HBJ7 922 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 ZNF446Q9NWS9 450 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 DONSONQ9NYP3 566 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 WASH4PA8MWX3 477 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 ATP8B1O43520 1251 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 ZSCAN5DPP0CG00 497 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 ETS1P14921 441 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 PFKLP17858 780 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 SLC11A2P49281 568 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 KCNQ1P51787 676 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 GPS1Q13098 491 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 P3H1Q32P28 736 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 IZUMO3Q5VZ72 239 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 HEATR6Q6AI08 1181 aaKnown RBP19.11■□□□□ 0.65
PRKCA-203ENST00000578063 HDXQ7Z353 690 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 C14orf80Q86SX3 495 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 ZNF683Q8IZ20 524 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 NPWQ8N729 165 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 FBXO25Q8TCJ0 367 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 PRMT1Q99873 361 aaKnown RBP19.11■□□□□ 0.65
PRKCA-203ENST00000578063 KLF16Q9BXK1 252 aaPredicted RBP19.11■□□□□ 0.65
PRKCA-203ENST00000578063 TRPC7Q9HCX4 862 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 VANGL2Q9ULK5 521 aa19.11■□□□□ 0.65
PRKCA-203ENST00000578063 LAMA2P24043 3122 aaKnown RBP19.1■□□□□ 0.65
PRKCA-203ENST00000578063 IGLV3-10A0A075B6K4 115 aa19.1■□□□□ 0.65
PRKCA-203ENST00000578063 DNALI1O14645 258 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms