RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 HDDC3Q8N4P3 179 aa14.61□□□□□ -0.07
SREBF1-217ENST00000577897 TTC9BQ8N6N2 239 aa14.61□□□□□ -0.07
SREBF1-217ENST00000577897 EIF1ADQ8N9N8 165 aaKnown RBP14.61□□□□□ -0.07
SREBF1-217ENST00000577897 PSMG2Q969U7 264 aa14.61□□□□□ -0.07
SREBF1-217ENST00000577897 MS4A14Q96JA4 679 aa14.61□□□□□ -0.07
SREBF1-217ENST00000577897 FAM84AQ96KN4 292 aa14.61□□□□□ -0.07
SREBF1-217ENST00000577897 NCAPGQ9BPX3 1015 aa14.61□□□□□ -0.07
SREBF1-217ENST00000577897 FAM83CQ9BQN1 747 aa14.61□□□□□ -0.07
SREBF1-217ENST00000577897 RAB17Q9H0T7 212 aa14.61□□□□□ -0.07
SREBF1-217ENST00000577897 SNX25Q9H3E2 840 aa14.61□□□□□ -0.07
SREBF1-217ENST00000577897 CCDC86Q9H6F5 360 aaKnown RBP14.61□□□□□ -0.07
SREBF1-217ENST00000577897 HOMER3Q9NSC5 361 aa14.61□□□□□ -0.07
SREBF1-217ENST00000577897 OGFRQ9NZT2 677 aa14.61□□□□□ -0.07
SREBF1-217ENST00000577897 FEZ2Q9UHY8 353 aaPredicted RBP14.61□□□□□ -0.07
SREBF1-217ENST00000577897 EVLQ9UI08 416 aaPredicted RBP14.61□□□□□ -0.07
SREBF1-217ENST00000577897 ABCA7Q8IZY2 2146 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 DDX3YO15523 660 aaKnown RBP14.6□□□□□ -0.07
SREBF1-217ENST00000577897 PROSCO94903 275 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 FGGP02679 453 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 CDR1P51861 262 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 RAD23BP54727 409 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 SLC8A3P57103 927 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 PTP4A2Q12974 167 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 ZNF268Q14587 947 aaPredicted RBP14.6□□□□□ -0.07
SREBF1-217ENST00000577897 C9orf57Q5W0N0 161 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 PIP4P1Q86T03 277 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 ITIH5Q86UX2 942 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 ATAD1Q8NBU5 361 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 C3orf20Q8ND61 904 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 TTC16Q8NEE8 873 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 ELMO3Q96BJ8 720 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 C18orf8Q96DM3 657 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 TNIP3Q96KP6 325 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 LPIN3Q9BQK8 851 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 GTPBP2Q9BX10 602 aaKnown RBP14.6□□□□□ -0.07
SREBF1-217ENST00000577897 SMYD3Q9H7B4 428 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 FSCN3Q9NQT6 498 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.6□□□□□ -0.07
SREBF1-217ENST00000577897 TMEM59LQ9UK28 342 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 CCL26Q9Y258 94 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 UTP11Q9Y3A2 253 aaKnown RBP14.6□□□□□ -0.07
SREBF1-217ENST00000577897 ASB3Q9Y575 518 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 SNX9Q9Y5X1 595 aa14.6□□□□□ -0.07
SREBF1-217ENST00000577897 CFAP46Q8IYW2 2715 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 MTMR11A4FU01 709 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 FAM221BA6H8Z2 402 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 ATMINO43313 823 aaPredicted RBP14.59□□□□□ -0.07
SREBF1-217ENST00000577897 HUS1O60921 280 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 CFIP05156 583 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 CDC25CP30307 473 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 AVPR1AP37288 418 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 GSCP56915 257 aaPredicted RBP14.59□□□□□ -0.07
SREBF1-217ENST00000577897 C19orf57Q0VDD7 668 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 SEMA3BQ13214 749 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 MAMLD1Q13495 774 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 CUL1Q13616 776 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 DHX34Q14147 1143 aaKnown RBP14.59□□□□□ -0.07
SREBF1-217ENST00000577897 RAB44Q7Z6P3 723 aaPredicted RBP14.59□□□□□ -0.07
SREBF1-217ENST00000577897 TMEM130Q8N3G9 435 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 SLC4A11Q8NBS3 891 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 C1orf131Q8NDD1 294 aaKnown RBP14.59□□□□□ -0.07
SREBF1-217ENST00000577897 CXorf38Q8TB03 319 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 MDM1Q8TC05 714 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 EZH1Q92800 747 aaPredicted RBP14.59□□□□□ -0.07
SREBF1-217ENST00000577897 EXOC4Q96A65 974 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 PKNOX2Q96KN3 472 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 KRT12Q99456 494 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 SEPT5Q99719 369 aaPredicted RBP14.59□□□□□ -0.07
SREBF1-217ENST00000577897 LRRC1Q9BTT6 524 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 SLC46A2Q9BY10 475 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 GOLPH3Q9H4A6 298 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 GDAP2Q9NXN4 497 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 DDX56Q9NY93 547 aaKnown RBP14.59□□□□□ -0.07
SREBF1-217ENST00000577897 MBD1Q9UIS9 605 aaPredicted RBP14.59□□□□□ -0.07
SREBF1-217ENST00000577897 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.59□□□□□ -0.07
SREBF1-217ENST00000577897 RAXQ9Y2V3 346 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 URB1O60287 2271 aaKnown RBP14.59□□□□□ -0.07
SREBF1-217ENST00000577897 HECTD1Q9ULT8 2610 aa14.59□□□□□ -0.07
SREBF1-217ENST00000577897 SPTA1P02549 2419 aa14.58□□□□□ -0.07
SREBF1-217ENST00000577897 SHROOM3Q8TF72 1996 aa14.58□□□□□ -0.07
SREBF1-217ENST00000577897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 FAM187AA6NFU0 413 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 KPNA7A9QM74 516 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 M0QYV0 167 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 PIRO00625 290 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 MAP3K13O43283 966 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 WEE1P30291 646 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 CHRNA3P32297 505 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 GJA4P35212 333 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 SSR1P43307 286 aaKnown RBP14.58□□□□□ -0.08
SREBF1-217ENST00000577897 NDST1P52848 882 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 CDH8P55286 799 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 SEC13P55735 322 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 RNASE9P60153 205 aaKnown RBP14.58□□□□□ -0.08
SREBF1-217ENST00000577897 VSNL1P62760 191 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 GPR17Q13304 367 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 VEPH1Q14D04 833 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 TAF12Q16514 161 aa14.58□□□□□ -0.08
SREBF1-217ENST00000577897 HADHQ16836 314 aaKnown RBP14.58□□□□□ -0.08
SREBF1-217ENST00000577897 ZNF423Q2M1K9 1284 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms