RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 I6L893 689 aaPredicted RBP12.85□□□□□ -0.35
TSEN54-204ENST00000577197 MTSS1O43312 755 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 COCHO43405 550 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 PAGE1O75459 146 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 LRIG2O94898 1065 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 RHOXF2BP0C7M4 288 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 TCF3P15923 654 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 GOT1P17174 413 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 HOXB8P17481 243 aaPredicted RBP12.85□□□□□ -0.35
TSEN54-204ENST00000577197 PTPN2P17706 415 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 MX2P20592 715 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 HARS2P49590 506 aaKnown RBP12.85□□□□□ -0.35
TSEN54-204ENST00000577197 OTUD4Q01804 1114 aaKnown RBP12.85□□□□□ -0.35
TSEN54-204ENST00000577197 CAV1Q03135 178 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 ADCY2Q08462 1091 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 PDK1Q15118 436 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 CTC1Q2NKJ3 1217 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 TTC39BQ5VTQ0 682 aaPredicted RBP12.85□□□□□ -0.35
TSEN54-204ENST00000577197 KAZNQ674X7 775 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 NCBP2-AS2Q69YL0 99 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 TTC27Q6P3X3 843 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 CDKL3Q8IVW4 592 aaPredicted RBP12.85□□□□□ -0.35
TSEN54-204ENST00000577197 ALLCQ8N6M5 410 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 VN1R2Q8NFZ6 395 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 FATE1Q969F0 183 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 ACSF2Q96CM8 615 aaPredicted RBP12.85□□□□□ -0.35
TSEN54-204ENST00000577197 TBC1D31Q96DN5 1066 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 PABPC5Q96DU9 382 aaKnown RBP12.85□□□□□ -0.35
TSEN54-204ENST00000577197 PKNOX2Q96KN3 472 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 RHOXF2Q9BQY4 288 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 FOXP3Q9BZS1 431 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 TSPYL1Q9H0U9 437 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 CCSER2Q9H7U1 834 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 PCDH9Q9HC56 1237 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 GPATCH2LQ9NWQ4 482 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 WHRNQ9P202 907 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 SFMBT1Q9UHJ3 866 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 DMGDHQ9UI17 866 aaKnown RBP12.85□□□□□ -0.35
TSEN54-204ENST00000577197 R3HDM2Q9Y2K5 976 aaKnown RBP12.85□□□□□ -0.35
TSEN54-204ENST00000577197 NEU2Q9Y3R4 380 aa12.85□□□□□ -0.35
TSEN54-204ENST00000577197 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.84□□□□□ -0.35
TSEN54-204ENST00000577197 SLC12A8A0AV02 714 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 DRGXA6NNA5 263 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 ZNF197O14709 1029 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 PPP1R12AO14974 1030 aaPredicted RBP12.84□□□□□ -0.35
TSEN54-204ENST00000577197 MSI1O43347 362 aaKnown RBP12.84□□□□□ -0.35
TSEN54-204ENST00000577197 GLP2RO95838 553 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 SLC11A2P49281 568 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 CDR1P51861 262 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 MMRN1Q13201 1228 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 ANKRD54Q6NXT1 300 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 EMBQ6PCB8 327 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 TMCO3Q6UWJ1 677 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 LRRC31Q6UY01 552 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 ADAT2Q7Z6V5 191 aaKnown RBP12.84□□□□□ -0.35
TSEN54-204ENST00000577197 ZNF683Q8IZ20 524 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 MICALL1Q8N3F8 863 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 C1orf54Q8WWF1 131 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 PRMT1Q99873 361 aaKnown RBP12.84□□□□□ -0.35
TSEN54-204ENST00000577197 KLF16Q9BXK1 252 aaPredicted RBP12.84□□□□□ -0.35
TSEN54-204ENST00000577197 PRKD2Q9BZL6 878 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 PHACTR1Q9C0D0 580 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 NACA2Q9H009 215 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 ANLNQ9NQW6 1124 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 DNPEPQ9ULA0 475 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 NEU3Q9UQ49 428 aa12.84□□□□□ -0.35
TSEN54-204ENST00000577197 DOCK4Q8N1I0 1966 aa12.83□□□□□ -0.35
TSEN54-204ENST00000577197 SYNJ2BP-COX16A0A087WUM0 186 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 LINC01565O15544 149 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 TTI1O43156 1089 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 DAPK3O43293 454 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 RBP3P10745 1247 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 RHOQP17081 205 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 ERCC2P18074 760 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 ITIH2P19823 946 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 GABRR2P28476 465 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 EPHB2P29323 1055 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 MAPKAPK2P49137 400 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 EIF3EP60228 445 aaKnown RBP12.83□□□□□ -0.36
TSEN54-204ENST00000577197 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.36
TSEN54-204ENST00000577197 P3H1Q32P28 736 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 ARHGAP15Q53QZ3 475 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 SLC45A4Q5BKX6 768 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 MS4A13Q5J8X5 152 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 ARTNQ5T4W7 220 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 CCNI2Q6ZMN8 369 aaPredicted RBP12.83□□□□□ -0.36
TSEN54-204ENST00000577197 CEP128Q6ZU80 1094 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 GAREM2Q75VX8 874 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 FAM217AQ8IXS0 508 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 PYROXD2Q8N2H3 581 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 RTL3Q8N8U3 475 aaKnown RBP12.83□□□□□ -0.36
TSEN54-204ENST00000577197 HDAC11Q96DB2 347 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 QKIQ96PU8 341 aaKnown RBP eCLIP12.83□□□□□ -0.36
TSEN54-204ENST00000577197 PNKPQ96T60 521 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 VAT1Q99536 393 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 ZNF334Q9HCZ1 680 aaPredicted RBP12.83□□□□□ -0.36
TSEN54-204ENST00000577197 TMEM248Q9NWD8 314 aa12.83□□□□□ -0.36
TSEN54-204ENST00000577197 CLDND1Q9NY35 253 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms