RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PABPC5Q96DU9 382 aaKnown RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 PHF21BQ96EK2 531 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 SLC4A9Q96Q91 983 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 EPS8L2Q9H6S3 715 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 TMEM191CA6NGB0 347 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 NKRFO15226 690 aaKnown RBP eCLIP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 ATP6V1G1O75348 118 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 JCHAINP01591 159 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 GNL1P36915 607 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 ACTR3P61158 418 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 CRADDP78560 199 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 RNASEH2BQ5TBB1 312 aaKnown RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 EFCAB12Q6NXP0 572 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 PRMT9Q6P2P2 845 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 FAM43BQ6ZT52 329 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 CCDC80Q76M96 950 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 KCTD14Q9BQ13 255 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 BAIAP3O94812 1187 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 PIK3R1P27986 724 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 AQP4P55087 323 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 CDH8P55286 799 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 PTP4A2Q12974 167 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZACNQ401N2 412 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 NIPA1Q7RTP0 329 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 BRSK2Q8IWQ3 736 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 SHISA4Q96DD7 197 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 RTKNQ9BST9 563 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 TRIM62Q9BVG3 475 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 SMARCAD1Q9H4L7 1026 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 PIF1Q9H611 641 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 PARVBQ9HBI1 364 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 DPP3Q9NY33 737 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 AAR2Q9Y312 384 aaKnown RBP13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 PCDHA11Q9Y5I1 949 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 PSMD12O00232 456 aaPredicted RBP13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 TNPO2O14787 897 aaKnown RBP13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 GRIA3P42263 894 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 ABCG1P45844 678 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 RAD23AP54725 363 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 KLF10Q13118 480 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 STK32CQ86UX6 486 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 HORMAD1Q86X24 394 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 C10orf107Q8IVU9 208 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 TRPC4APQ8TEL6 797 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 MARK4Q96L34 752 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 NSMCE2Q96MF7 247 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 UTP6Q9NYH9 597 aaKnown RBP13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 UBP1Q9NZI7 540 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 CD274Q9NZQ7 290 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 VAV3Q9UKW4 847 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 NDUFAF1Q9Y375 327 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 MON2Q7Z3U7 1717 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 RNF103O00237 685 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 PYGLP06737 847 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 ITGA2BP08514 1039 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 TPH1P17752 444 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 LRPAP1P30533 357 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 FNBP1LQ5T0N5 605 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 GPR107Q5VW38 600 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZBTB46Q86UZ6 589 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 CPNE8Q86YQ8 564 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 TTLL6Q8N841 843 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 BORCS5Q969J3 196 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 NDFIP2Q9NV92 336 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 TSPAN16Q9UKR8 245 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 RAB26Q9ULW5 256 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 NFAT5O94916 1531 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 TYW5A2RUC4 315 aaKnown RBP13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 KLHL33A6NCF5 533 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 ASNA1O43681 348 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 PPP1R11O60927 126 aaPredicted RBP13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 FAM155BO75949 473 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 MICAL2O94851 1124 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 NCAM1P13591 858 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 CDH3P22223 829 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 EPHA3P29320 983 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 ARPP19P56211 112 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 MRPL28Q13084 256 aaKnown RBP13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 TAF5Q15542 800 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 TDRD10Q5VZ19 366 aaKnown RBP13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 BANPQ8N9N5 519 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 MKL1Q969V6 931 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 RNF157Q96PX1 679 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 SPON2Q9BUD6 331 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 BBS2Q9BXC9 721 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 TMEM39BQ9GZU3 492 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 NOL6Q9H6R4 1146 aaKnown RBP13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 POLIQ9UNA4 740 aa13.41□□□□□ -0.26
PCDHGB3-201ENST00000576222 ASTN2O75129 1339 aaPredicted RBP13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 M0R2N6 131 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 TXNP10599 105 aaKnown RBP13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 PSMB9P28065 219 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 GEMP55040 296 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 TSPY1Q01534 308 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 TMEM63BQ5T3F8 832 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 LRRC8DQ7L1W4 858 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 PTAR1Q7Z6K3 402 aaPredicted RBP13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 THEM5Q8N1Q8 247 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 HELQQ8TDG4 1101 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 CASS4Q9NQ75 786 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms