RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CACNA2D2Q9NY47 1150 aa9□□□□□ -0.97
SMG6-216ENST00000575176 AIPL1Q9NZN9 384 aa9□□□□□ -0.97
SMG6-216ENST00000575176 THAP10Q9P2Z0 257 aaPredicted RBP9□□□□□ -0.97
SMG6-216ENST00000575176 OR51B4Q9Y5P0 310 aa9□□□□□ -0.97
SMG6-216ENST00000575176 HS3ST4Q9Y661 456 aa9□□□□□ -0.97
SMG6-216ENST00000575176 IGLV3-10A0A075B6K4 115 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 A0A1W2PQJ5 194 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 SMTNL1A8MU46 457 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 WASH3PC4AMC7 463 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 DDX3XO00571 662 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMG6-216ENST00000575176 DCLK1O15075 740 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 APBB3O95704 486 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 MOCS2O96007 188 aaPredicted RBP8.99□□□□□ -0.97
SMG6-216ENST00000575176 LMNAP02545 664 aaKnown RBP8.99□□□□□ -0.97
SMG6-216ENST00000575176 NDUFV2P19404 249 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 TACR2P21452 398 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 HARS2P49590 506 aaKnown RBP8.99□□□□□ -0.97
SMG6-216ENST00000575176 ZNF445P59923 1031 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 LMAN2Q12907 356 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 EIF4HQ15056 248 aaKnown RBP8.99□□□□□ -0.97
SMG6-216ENST00000575176 MAP7D1Q3KQU3 841 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 SLC25A52Q3SY17 297 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 CCDC14Q49A88 953 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 MPPE1Q53F39 396 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 FAM102AQ5T9C2 384 aaPredicted RBP8.99□□□□□ -0.97
SMG6-216ENST00000575176 RAP1GAP2Q684P5 730 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 HEATR6Q6AI08 1181 aaKnown RBP8.99□□□□□ -0.97
SMG6-216ENST00000575176 ZC3H14Q6PJT7 736 aaKnown RBP8.99□□□□□ -0.97
SMG6-216ENST00000575176 TRIM72Q6ZMU5 477 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 UNC45BQ8IWX7 931 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 DCLK2Q8N568 766 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 HJURPQ8NCD3 748 aaPredicted RBP8.99□□□□□ -0.97
SMG6-216ENST00000575176 C3orf20Q8ND61 904 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 IPO4Q8TEX9 1081 aaKnown RBP8.99□□□□□ -0.97
SMG6-216ENST00000575176 GAB3Q8WWW8 586 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 BTN2A3PQ96KV6 586 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 CFAP57Q96MR6 1250 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 XPO6Q96QU8 1125 aaKnown RBP8.99□□□□□ -0.97
SMG6-216ENST00000575176 SPAG5Q96R06 1193 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 AGPAT1Q99943 283 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 TRIM62Q9BVG3 475 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 TPSD1Q9BZJ3 242 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 SLC6A17Q9H1V8 727 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 SEMA4AQ9H3S1 761 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 FAM204AQ9H8W3 233 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 ABCB8Q9NUT2 735 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 DDIT4Q9NX09 232 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 MBD1Q9UIS9 605 aaPredicted RBP8.99□□□□□ -0.97
SMG6-216ENST00000575176 SNX10Q9Y5X0 201 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 RAD54BQ9Y620 910 aa8.99□□□□□ -0.97
SMG6-216ENST00000575176 LRRK1Q38SD2 2015 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 NCOR2Q9Y618 2525 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 M0QYT0 321 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 TBL1XO60907 577 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 ATG13O75143 517 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 PAGE1O75459 146 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 LUC7L3O95232 432 aaKnown RBP8.98□□□□□ -0.97
SMG6-216ENST00000575176 PLEKP08567 350 aaPredicted RBP8.98□□□□□ -0.97
SMG6-216ENST00000575176 HOXB2P14652 356 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 PTMSP20962 102 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 NTSR1P30989 418 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 P2RY2P41231 377 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 WASP42768 502 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 PTPN9P43378 593 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 DGKEP52429 567 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 HDAC4P56524 1084 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 ZNF234Q14588 700 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 C15orf59Q2T9L4 293 aaPredicted RBP8.98□□□□□ -0.97
SMG6-216ENST00000575176 ALFQ53S48 1182 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 ANO7Q6IWH7 933 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 FBXL22Q6P050 247 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 LRSAM1Q6UWE0 723 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 KBTBD6Q86V97 674 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 ERICH1Q86X53 443 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 CFAP52Q8N1V2 620 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 FAM160A2Q8N612 972 aaPredicted RBP8.98□□□□□ -0.97
SMG6-216ENST00000575176 ARFGAP1Q8N6T3 406 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 FIBINQ8TAL6 211 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 DDI1Q8WTU0 396 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 TTC17Q96AE7 1141 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 ZC3H10Q96K80 434 aaKnown RBP8.98□□□□□ -0.97
SMG6-216ENST00000575176 NOX5Q96PH1 765 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 MAGEB5Q9BZ81 275 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 TRIM7Q9C029 511 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 XPO4Q9C0E2 1151 aaKnown RBP8.98□□□□□ -0.97
SMG6-216ENST00000575176 MKRN2Q9H000 416 aaKnown RBP8.98□□□□□ -0.97
SMG6-216ENST00000575176 DUSP15Q9H1R2 295 aaPredicted RBP8.98□□□□□ -0.97
SMG6-216ENST00000575176 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.98□□□□□ -0.97
SMG6-216ENST00000575176 GGA2Q9UJY4 613 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 STON1Q9Y6Q2 735 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 ITIH6Q6UXX5 1313 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 FRYQ5TBA9 3013 aa8.98□□□□□ -0.97
SMG6-216ENST00000575176 AKAP13Q12802 2813 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 TCRBV21S2A2A0A5A6 115 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 TBC1D3BA6NDS4 549 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 GOLGA8SH3BPF8 625 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 CAPN9O14815 690 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 AXIN1O15169 862 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 ATMINO43313 823 aaPredicted RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 CNTN5O94779 1100 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms