RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 SCAPQ12770 1279 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 TTC39BQ5VTQ0 682 aaPredicted RBP24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 OVOS1Q6IE37 1185 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 CASC4Q6P4E1 433 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 OTOAQ7RTW8 1153 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 METTL23Q86XA0 190 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 STKLD1Q8NE28 680 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 APOPT1Q96IL0 206 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 STARD13Q9Y3M8 1113 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 PCDHA11Q9Y5I1 949 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 CYP11A1P05108 521 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 OR4Q2P0C623 313 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 MGAT1P26572 445 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 FDFT1P37268 417 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 RTN4RL1Q86UN2 441 aaPredicted RBP24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 ALKBH8Q96BT7 664 aaKnown RBP24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 OXNAD1Q96HP4 312 aaPredicted RBP24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 KLHL14Q9P2G3 628 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 SF3B1O75533 1304 aaKnown RBP eCLIP24.34■■□□□ 1.493e-6■■■■■ 69.5
NPLOC4-217ENST00000574897 HMX2A2RU54 273 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 M0QZQ0 153 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 TRDMT1O14717 391 aaKnown RBP24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 PPP1R12AO14974 1030 aaPredicted RBP24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 TM9SF1O15321 606 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 OPHN1O60890 802 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 ZNF598Q86UK7 904 aaKnown RBP24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 ZNF280BQ86YH2 543 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 PGAP3Q96FM1 320 aaPredicted RBP24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 WDCPQ9H6R7 721 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 ETV4P43268 484 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 GALNTL6Q49A17 601 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 PID1Q7Z2X4 250 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 GRAMD1AQ96CP6 724 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 STAMBPL1Q96FJ0 436 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 AGAP3Q96P47 875 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 GORASP1Q9BQQ3 440 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 TRPV6Q9H1D0 765 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 DMAP1Q9NPF5 467 aaPredicted RBP24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 IL1RAPL1Q9NZN1 696 aa24.34■■□□□ 1.49
NPLOC4-217ENST00000574897 COL4A4P53420 1690 aaPredicted RBP24.33■■□□□ 1.49
NPLOC4-217ENST00000574897 FAM159BA6NKW6 160 aa24.33■■□□□ 1.49
NPLOC4-217ENST00000574897 USP12O75317 370 aa24.33■■□□□ 1.49
NPLOC4-217ENST00000574897 DNAJC8O75937 253 aaPredicted RBP24.33■■□□□ 1.49
NPLOC4-217ENST00000574897 CST5P28325 142 aaPredicted RBP24.33■■□□□ 1.49
NPLOC4-217ENST00000574897 ARNTL2Q8WYA1 636 aa24.33■■□□□ 1.49
NPLOC4-217ENST00000574897 TTC17Q96AE7 1141 aa24.33■■□□□ 1.49
NPLOC4-217ENST00000574897 PGBD4Q96DM1 585 aa24.33■■□□□ 1.49
NPLOC4-217ENST00000574897 OR12D3Q9UGF7 316 aa24.33■■□□□ 1.49
NPLOC4-217ENST00000574897 RASSF9O75901 435 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 STK10O94804 968 aaKnown RBP24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 SNRPAP09012 282 aaKnown RBP24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 PTPN3P26045 913 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 HNRNPH1P31943 449 aaKnown RBP24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 CXCR3P49682 368 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 ACLYP53396 1101 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 OVGP1Q12889 678 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 MBTPS1Q14703 1052 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 MROH9Q5TGP6 573 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 PM20D1Q6GTS8 502 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 CES3Q6UWW8 571 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 DQX1Q8TE96 717 aaKnown RBP24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 RFPL1O75677 317 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 DDHD2O94830 711 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 LRIG2O94898 1065 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 RNF43Q68DV7 783 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 LRRC8BQ6P9F7 803 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 SYBUQ9NX95 663 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 KLHL8Q9P2G9 620 aaPredicted RBP24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 ZNF180Q9UJW8 692 aa24.32■■□□□ 1.48
NPLOC4-217ENST00000574897 TOP3BO95985 862 aaKnown RBP24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 GSTA1P08263 222 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 NCALDP61601 193 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 PCSK9Q8NBP7 692 aaKnown RBP24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 CELF6Q96J87 481 aaKnown RBP24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 SRPK1Q96SB4 655 aaKnown RBP24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 RXFP1Q9HBX9 757 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 NUDT5Q9UKK9 219 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 KRT37O76014 449 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 DHRS4L1P0CG22 281 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 ALADP13716 330 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 EPHB2P29323 1055 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 AIF1P55008 147 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 SARNPP82979 210 aaKnown RBP24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 PARP6Q2NL67 630 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 ARL13BQ3SXY8 428 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 LINC01599Q8WXQ3 324 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 RNF34Q969K3 372 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 SUSD3Q96L08 255 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 SLC13A1Q9BZW2 595 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 ECT2Q9H8V3 914 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 PRDM16Q9HAZ2 1276 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 MOCS1Q9NZB8 636 aa24.31■■□□□ 1.48
NPLOC4-217ENST00000574897 VWA8A3KMH1 1905 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 RPLP2P05387 115 aaKnown RBP24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 CKBP12277 381 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 ZBTB17Q13105 803 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 NPHS2Q9NP85 383 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 SDR42E2A6NKP2 422 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 COPEO14579 308 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms