RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 FBXO10Q9UK96 956 aa13.21□□□□□ -0.29
TRAPPC1-206ENST00000573989 SLC27A6Q9Y2P4 619 aa13.21□□□□□ -0.29
TRAPPC1-206ENST00000573989 MYO18AQ92614 2054 aaKnown RBP13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 TMEM191CA6NGB0 347 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 GFRA2O00451 464 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 CCP110O43303 1012 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 LAMTOR5O43504 91 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 IPO7O95373 1038 aaKnown RBP13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 HOXD9P28356 352 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 OXCT1P55809 520 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 MRPS21P82921 87 aaKnown RBP13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 CDH18Q13634 790 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 ACAP1Q15027 740 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 HSF5Q4G112 596 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 TRMT11Q7Z4G4 463 aaKnown RBP13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 ANKS1BQ7Z6G8 1248 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 DNAAF5Q86Y56 855 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 TMTC1Q8IUR5 882 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 C1orf210Q8IVY1 113 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 MFN1Q8IWA4 741 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 SPEM1Q8N4L4 309 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 ACDQ96AP0 544 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 RPRD1AQ96P16 312 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 PPP1R9BQ96SB3 815 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 NUP85Q9BW27 656 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 THAP2Q9H0W7 228 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 IRF2BPLQ9H1B7 796 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 FBRSL1Q9HCM7 1045 aaKnown RBP13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 RBM12Q9NTZ6 932 aaKnown RBP13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 DLGAP2Q9P1A6 1054 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 CALCOCO1Q9P1Z2 691 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 STIM2Q9P246 746 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 XPO7Q9UIA9 1087 aaKnown RBP13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 HS3ST4Q9Y661 456 aa13.2□□□□□ -0.3
TRAPPC1-206ENST00000573989 A0A1B0GVM2 712 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 TCAF2A6NFQ2 919 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 H0Y626 953 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 MYO1FO00160 1098 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 TIMM44O43615 452 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 RNF40O75150 1001 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 MOCS3O95396 460 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 CYP1A2P05177 515 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 ADRA1BP35368 520 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 CCR3P51677 355 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 ATXN1P54253 815 aaKnown RBP13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 HDAC4P56524 1084 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 AUHQ13825 339 aaKnown RBP13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 PIGHQ14442 188 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 EIF4HQ15056 248 aaKnown RBP13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 SPA17Q15506 151 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 EFHC2Q5JST6 749 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 NAIF1Q69YI7 327 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 FBXL22Q6P050 247 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 SCYL2Q6P3W7 929 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 MAMSTRQ6ZN01 415 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 SLFN11Q7Z7L1 901 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 CARNMT1Q8N4J0 409 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 SPC24Q8NBT2 197 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 WFIKKN2Q8TEU8 576 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 NTAN1Q96AB6 310 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 PRMT1Q99873 361 aaKnown RBP13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 ADAM33Q9BZ11 813 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 CTTNBP2NLQ9P2B4 639 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 UVRAGQ9P2Y5 699 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 IP6K2Q9UHH9 426 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 INTUQ9ULD6 942 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 VANGL2Q9ULK5 521 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 NENFQ9UMX5 172 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 DOCK4Q8N1I0 1966 aa13.19□□□□□ -0.3
TRAPPC1-206ENST00000573989 CHURC1-FNTBB4DL54 471 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 K7EQS6 105 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 NPC1O15118 1278 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 PRPSAP2O60256 369 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 CLDN11O75508 207 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 LUC7L3O95232 432 aaKnown RBP13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 CISD3P0C7P0 127 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 TMEM253P0C7T8 217 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 CDH4P55283 916 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 SEC13P55735 322 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 GSDMDP57764 484 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 RPS24P62847 133 aaKnown RBP13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 MTAPQ13126 283 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 SH3PXD2AQ5TCZ1 1133 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 RNF43Q68DV7 783 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 SDE2Q6IQ49 451 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 CHST9Q7L1S5 443 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 AHI1Q8N157 1196 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 PHTF2Q8N3S3 785 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 ZNF513Q8N8E2 541 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 RPLP0P6Q8NHW5 317 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 FIBINQ8TAL6 211 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 ZNF564Q8TBZ8 553 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 ANP32BQ92688 251 aaKnown RBP13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 PRICKLE1Q96MT3 831 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 OSBPL2Q9H1P3 480 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 RETREG1Q9H6L5 497 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 GRPEL1Q9HAV7 217 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 SPTLC3Q9NUV7 552 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 KIAA1522Q9P206 1035 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms