RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, human

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD3-216	ENST00000573936	SPTBN2	O15020	2390 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936		A0A087X0T9	212 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936		F5H5T6	163 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	GFRA2	O00451	464 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	TSPAN3	O60637	253 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	ATG13	O75143	517 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	TULP3	O75386	442 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	KAT7	O95251	611 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	FAM228B	P0C875	321 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	TACR2	P21452	398 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	RFC1	P35251	1148 aa	Predicted RBP	11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	SLC6A11	P48066	632 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	DGKG	P49619	791 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	ZNF143	P52747	638 aa	Predicted RBP	11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	ATP11A	P98196	1134 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	CSTF1	Q05048	431 aa	Known RBP	11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	MAMLD1	Q13495	774 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	CCIN	Q13939	588 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	ARL13B	Q3SXY8	428 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	CCDC14	Q49A88	953 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	FAM133B	Q5BKY9	247 aa	Known RBP	11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	PPP1R15B	Q5SWA1	713 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	NADSYN1	Q6IA69	706 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	FSTL4	Q6MZW2	842 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	TRNP1	Q6NT89	227 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	CHSY1	Q86X52	802 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	HJURP	Q8NCD3	748 aa	Predicted RBP	11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	KCNV2	Q8TDN2	545 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	CENPI	Q92674	756 aa	Predicted RBP	11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	CNTNAP3B	Q96NU0	1288 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	MCEE	Q96PE7	176 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	HAPLN3	Q96S86	360 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	NCAPG	Q9BPX3	1015 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	CNTNAP3	Q9BZ76	1288 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	TKTL2	Q9H0I9	626 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	CHRD	Q9H2X0	955 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	PIGV	Q9NUD9	493 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	MYO1A	Q9UBC5	1043 aa		11.42	□□□□□ -0.58
CHD3-216	ENST00000573936	GOLGA6L7	A0A1B0GV03	622 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	TBC1D3B	A6NDS4	549 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	PRR5-ARHGAP8	B1AHC4	643 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	TBL1X	O60907	577 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	GJB6	O95452	261 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	EGF	P01133	1207 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	TFE3	P19532	575 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	SLC6A4	P31645	630 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	ARHGAP8	P85298	464 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	CDO1	Q16878	200 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	ASTE1	Q2TB18	679 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	ZNF528	Q3MIS6	628 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	MS4A13	Q5J8X5	152 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	RABGAP1L	Q5R372	815 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	C10orf76	Q5T2E6	689 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	OTUD1	Q5VV17	481 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	RAP1GAP2	Q684P5	730 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	RFWD3	Q6PCD5	774 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	LRRC31	Q6UY01	552 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	MAMSTR	Q6ZN01	415 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	C12orf40	Q86WS4	652 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	LGI2	Q8N0V4	545 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	TC2N	Q8N9U0	490 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	FNIP1	Q8TF40	1166 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	FAM172A	Q8WUF8	416 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	BHMT	Q93088	406 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	C1orf74	Q96LT6	269 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	PANX2	Q96RD6	677 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	CHP1	Q99653	195 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	CNPY3	Q9BT09	278 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	PLK2	Q9NYY3	685 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	FBXO4	Q9UKT5	387 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	CDV3	Q9UKY7	258 aa	Known RBP	11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	SLC27A6	Q9Y2P4	619 aa		11.41	□□□□□ -0.58
CHD3-216	ENST00000573936	TMEM191C	A6NGB0	347 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936		K7EQS6	105 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	TIMM44	O43615	452 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	KRT37	O76014	449 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	RNF8	O76064	485 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	H2AFZ	P0C0S5	128 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	CISD3	P0C7P0	127 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	PSMA2	P25787	234 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	HOXD9	P28356	352 aa	Predicted RBP	11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	CYLC1	P35663	651 aa	Predicted RBP	11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	GALC	P54803	685 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	AIF1	P55008	147 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	RPL7A	P62424	266 aa	Known RBP	11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	MRPS21	P82921	87 aa	Known RBP	11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	KDSR	Q06136	332 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	GFPT1	Q06210	699 aa	Predicted RBP	11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	ACAP1	Q15027	740 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	HSF5	Q4G112	596 aa	Predicted RBP	11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	H2AFV	Q71UI9	128 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	FAM131B	Q86XD5	332 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	DNAAF5	Q86Y56	855 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	CCDC170	Q8IYT3	715 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	PHTF2	Q8N3S3	785 aa		11.4	□□□□□ -0.58
CHD3-216	ENST00000573936	SPEM1	Q8N4L4	309 aa		11.4	□□□□□ -0.58

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