RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 EFCAB3Q8N7B9 438 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 PPP4R1Q8TF05 950 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 CDKL2Q92772 493 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 CCDC124Q96CT7 223 aaKnown RBP19.6■□□□□ 0.73
SCARF1-206ENST00000573852 TRIM4Q9C037 500 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 DNAJC28Q9NX36 388 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 SNX9Q9Y5X1 595 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 HCRTO43612 131 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 INSRRP14616 1297 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 SLC26A2P50443 739 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 RAB27AP51159 221 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 CES3Q6UWW8 571 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 RASSF3Q86WH2 238 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 ACTRT2Q8TDY3 377 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 OLFM3Q96PB7 478 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 PGLYRP2Q96PD5 576 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 COPG2Q9UBF2 871 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 CDH22Q9UJ99 828 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 USP3Q9Y6I4 520 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 CITO14578 2027 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 LOC100653049A0A140TA62 436 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 KRT34O76011 436 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 TOMM70O94826 608 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 SETSIPP0DME0 302 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 FDFT1P37268 417 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 BTKQ06187 659 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 RBBP5Q15291 538 aaKnown RBP19.59■□□□□ 0.73
SCARF1-206ENST00000573852 MTHFD1LQ6UB35 978 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 PHTF2Q8N3S3 785 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 AFG1LQ8WV93 481 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 PDGFCQ9NRA1 345 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 ZDHHC7Q9NXF8 308 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 GTF2IRD1Q9UHL9 959 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 AKT3Q9Y243 479 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 AP1G2O75843 785 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 ERVK-10P10266 1014 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 RALBP11234 206 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 ALOX15P16050 662 aaPredicted RBP19.59■□□□□ 0.73
SCARF1-206ENST00000573852 PGAM1P18669 254 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 NCF2P19878 526 aaPredicted RBP19.59■□□□□ 0.73
SCARF1-206ENST00000573852 GRK2P25098 689 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 ABCE1P61221 599 aaKnown RBP19.59■□□□□ 0.73
SCARF1-206ENST00000573852 MSLNQ13421 630 aaPredicted RBP19.59■□□□□ 0.73
SCARF1-206ENST00000573852 ITGA9Q13797 1035 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 HIPK4Q8NE63 616 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 DPEP3Q9H4B8 488 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 SYBUQ9NX95 663 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 GGA3Q9NZ52 723 aa19.59■□□□□ 0.73
SCARF1-206ENST00000573852 USP2O75604 605 aaPredicted RBP19.58■□□□□ 0.73
SCARF1-206ENST00000573852 ZMPSTE24O75844 475 aa19.58■□□□□ 0.73
SCARF1-206ENST00000573852 TXNP10599 105 aaKnown RBP19.58■□□□□ 0.73
SCARF1-206ENST00000573852 ITGAXP20702 1163 aa19.58■□□□□ 0.73
SCARF1-206ENST00000573852 POU5F1BQ06416 359 aa19.58■□□□□ 0.73
SCARF1-206ENST00000573852 BIRC2Q13490 618 aa19.58■□□□□ 0.73
SCARF1-206ENST00000573852 VGLL4Q14135 290 aa19.58■□□□□ 0.73
SCARF1-206ENST00000573852 DLK2Q6UY11 383 aa19.58■□□□□ 0.73
SCARF1-206ENST00000573852 FRMD7Q6ZUT3 714 aa19.58■□□□□ 0.73
SCARF1-206ENST00000573852 DEFB107AQ8IZN7 70 aa19.58■□□□□ 0.73
SCARF1-206ENST00000573852 C7orf31Q8N865 590 aa19.58■□□□□ 0.73
SCARF1-206ENST00000573852 OXCT2Q9BYC2 517 aaPredicted RBP19.58■□□□□ 0.73
SCARF1-206ENST00000573852 LCP1P13796 627 aa19.58■□□□□ 0.72
SCARF1-206ENST00000573852 TYK2P29597 1187 aa19.58■□□□□ 0.72
SCARF1-206ENST00000573852 MLH1P40692 756 aa19.58■□□□□ 0.72
SCARF1-206ENST00000573852 HARS2P49590 506 aaKnown RBP19.58■□□□□ 0.72
SCARF1-206ENST00000573852 ACAD11Q709F0 780 aa19.58■□□□□ 0.72
SCARF1-206ENST00000573852 HPS6Q86YV9 775 aa19.58■□□□□ 0.72
SCARF1-206ENST00000573852 AZIN2Q96A70 460 aa19.58■□□□□ 0.72
SCARF1-206ENST00000573852 FAM124BQ9H5Z6 455 aaPredicted RBP19.58■□□□□ 0.72
SCARF1-206ENST00000573852 POMPQ9Y244 141 aa19.58■□□□□ 0.72
SCARF1-206ENST00000573852 RNF103O00237 685 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 MFSD11O43934 449 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 CNMDO75829 334 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 PEX2P28328 305 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 TCHHL1Q5QJ38 904 aaPredicted RBP19.57■□□□□ 0.72
SCARF1-206ENST00000573852 GADL1Q6ZQY3 521 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 SLC26A9Q7LBE3 791 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 CMC1Q7Z7K0 106 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 IFNLR1Q8IU57 520 aaPredicted RBP19.57■□□□□ 0.72
SCARF1-206ENST00000573852 ZDHHC17Q8IUH5 632 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.57■□□□□ 0.72
SCARF1-206ENST00000573852 CDK7P50613 346 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 AQP4P55087 323 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 USP4Q13107 963 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 INSCQ1MX18 579 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 CFAP157Q5JU67 520 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 TNS4Q8IZW8 715 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 GDPD5Q8WTR4 605 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 CMTM5Q96DZ9 223 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 KLHL4Q9C0H6 718 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 MAN1C1Q9NR34 630 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 ERAP1Q9NZ08 941 aa19.57■□□□□ 0.72
SCARF1-206ENST00000573852 DCXO43602 365 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 ZBTB14O43829 449 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 TSPAN1O60635 241 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 F7P08709 466 aaPredicted RBP19.56■□□□□ 0.72
SCARF1-206ENST00000573852 MYL4P12829 197 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 CPA3P15088 417 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 PSMB4P28070 264 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 GSTT1P30711 240 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 OLIG2Q13516 323 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms