RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 IL27RAQ6UWB1 636 aa22.88■■□□□ 1.25
SNF8-216ENST00000573795 MYEOVQ96EZ4 313 aa22.88■■□□□ 1.25
SNF8-216ENST00000573795 MYO19Q96H55 970 aa22.88■■□□□ 1.25
SNF8-216ENST00000573795 PRICKLE1Q96MT3 831 aaPredicted RBP22.88■■□□□ 1.25
SNF8-216ENST00000573795 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.88■■□□□ 1.25
SNF8-216ENST00000573795 PLA2G4CQ9UP65 541 aa22.88■■□□□ 1.25
SNF8-216ENST00000573795 BAHCC1Q9P281 2608 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 PAEPP09466 180 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 DLDP09622 509 aaKnown RBP22.87■■□□□ 1.25
SNF8-216ENST00000573795 LRRC63Q05C16 580 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 SCAPQ12770 1279 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 MPP7Q5T2T1 576 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 NADSYN1Q6IA69 706 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 CCNI2Q6ZMN8 369 aaPredicted RBP22.87■■□□□ 1.25
SNF8-216ENST00000573795 SETD7Q8WTS6 366 aaKnown RBP22.87■■□□□ 1.25
SNF8-216ENST00000573795 IRGQQ8WZA9 623 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 SNX19Q92543 992 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 CCDC34Q96HJ3 373 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 ORAI3Q9BRQ5 295 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 MTG2Q9H4K7 406 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 PLXNA2O75051 1894 aa22.87■■□□□ 1.25
SNF8-216ENST00000573795 NYNRINQ9P2P1 1898 aaKnown RBP22.87■■□□□ 1.25
SNF8-216ENST00000573795 TBL1XO60907 577 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 DKK1O94907 266 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 FYNP06241 537 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 BRD2P25440 801 aaKnown RBP22.86■■□□□ 1.25
SNF8-216ENST00000573795 AFF3P51826 1226 aaKnown RBP22.86■■□□□ 1.25
SNF8-216ENST00000573795 KIF19Q2TAC6 998 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 LAYNQ6UX15 382 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 LMO3Q8TAP4 145 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 BIRC7Q96CA5 298 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 FBRSQ9HAH7 460 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 TM9SF3Q9HD45 589 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 OSGEPQ9NPF4 335 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 APOBEC2Q9Y235 224 aaKnown RBP22.86■■□□□ 1.25
SNF8-216ENST00000573795 BTBD3Q9Y2F9 522 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 PCDHB4Q9Y5E5 795 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 PCDHGB2Q9Y5G2 931 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 SNX11Q9Y5W9 270 aa22.86■■□□□ 1.25
SNF8-216ENST00000573795 LOC400499M0QZD8 3231 aa22.85■■□□□ 1.25
SNF8-216ENST00000573795 M0QYV0 167 aa22.85■■□□□ 1.25
SNF8-216ENST00000573795 PMM2O15305 246 aa22.85■■□□□ 1.25
SNF8-216ENST00000573795 ACSL4O60488 711 aa22.85■■□□□ 1.25
SNF8-216ENST00000573795 SEMA4FO95754 770 aa22.85■■□□□ 1.25
SNF8-216ENST00000573795 LTFP02788 710 aa22.85■■□□□ 1.25
SNF8-216ENST00000573795 CD44P16070 742 aaKnown RBP22.85■■□□□ 1.25
SNF8-216ENST00000573795 ZBTB16Q05516 673 aa22.85■■□□□ 1.25
SNF8-216ENST00000573795 CNGA2Q16280 664 aa22.85■■□□□ 1.25
SNF8-216ENST00000573795 FCRL2Q96LA5 508 aaPredicted RBP22.85■■□□□ 1.25
SNF8-216ENST00000573795 NT5C1BQ96P26 610 aa22.85■■□□□ 1.25
SNF8-216ENST00000573795 IRX2Q9BZI1 471 aaPredicted RBP22.85■■□□□ 1.25
SNF8-216ENST00000573795 KIAA1522Q9P206 1035 aaPredicted RBP22.85■■□□□ 1.25
SNF8-216ENST00000573795 INTS6Q9UL03 887 aaKnown RBP22.85■■□□□ 1.25
SNF8-216ENST00000573795 LHX6Q9UPM6 363 aa22.85■■□□□ 1.25
SNF8-216ENST00000573795 ADAMTS20P59510 1910 aa22.84■■□□□ 1.25
SNF8-216ENST00000573795 TBX4P57082 545 aa22.84■■□□□ 1.25
SNF8-216ENST00000573795 KCNT1Q5JUK3 1230 aa22.84■■□□□ 1.25
SNF8-216ENST00000573795 NUGGCQ68CJ6 796 aa22.84■■□□□ 1.25
SNF8-216ENST00000573795 LRSAM1Q6UWE0 723 aa22.84■■□□□ 1.25
SNF8-216ENST00000573795 UNC45BQ8IWX7 931 aa22.84■■□□□ 1.25
SNF8-216ENST00000573795 AZIN2Q96A70 460 aa22.84■■□□□ 1.25
SNF8-216ENST00000573795 TTC17Q96AE7 1141 aa22.84■■□□□ 1.25
SNF8-216ENST00000573795 BTBD1Q9H0C5 482 aa22.84■■□□□ 1.25
SNF8-216ENST00000573795 APC2O95996 2303 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 FLRT2O43155 660 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 IRAK2O43187 625 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 DNTTP04053 509 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 ATP5BP06576 529 aaKnown RBP22.83■■□□□ 1.25
SNF8-216ENST00000573795 ATXN1LP0C7T5 689 aaKnown RBP22.83■■□□□ 1.25
SNF8-216ENST00000573795 POLR2EP19388 210 aaKnown RBP22.83■■□□□ 1.25
SNF8-216ENST00000573795 GRIA4P48058 902 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 SLC11A2P49281 568 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 ZNF776Q68DI1 518 aaPredicted RBP22.83■■□□□ 1.25
SNF8-216ENST00000573795 ARHGEF19Q8IW93 802 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 MFN1Q8IWA4 741 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 PPM1KQ8N3J5 372 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 FIBINQ8TAL6 211 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 DQX1Q8TE96 717 aaKnown RBP22.83■■□□□ 1.25
SNF8-216ENST00000573795 SMARCE1Q969G3 411 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 MRGPRX3Q96LB0 322 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 HSFY1Q96LI6 401 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 RSPH9Q9H1X1 276 aaPredicted RBP22.83■■□□□ 1.25
SNF8-216ENST00000573795 METTL14Q9HCE5 456 aaKnown RBP22.83■■□□□ 1.25
SNF8-216ENST00000573795 STIM2Q9P246 746 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 ANKRD6Q9Y2G4 727 aa22.83■■□□□ 1.25
SNF8-216ENST00000573795 SMG1Q96Q15 3661 aaKnown RBP22.82■■□□□ 1.24
SNF8-216ENST00000573795 SMC2O95347 1197 aa22.82■■□□□ 1.24
SNF8-216ENST00000573795 IGHV4-34P06331 123 aa22.82■■□□□ 1.24
SNF8-216ENST00000573795 CD27P26842 260 aa22.82■■□□□ 1.24
SNF8-216ENST00000573795 RPL34P49207 117 aaKnown RBP22.82■■□□□ 1.24
SNF8-216ENST00000573795 RPS24P62847 133 aaKnown RBP22.82■■□□□ 1.24
SNF8-216ENST00000573795 HJURPQ8NCD3 748 aaPredicted RBP22.82■■□□□ 1.24
SNF8-216ENST00000573795 RHBDD1Q8TEB9 315 aa22.82■■□□□ 1.24
SNF8-216ENST00000573795 SLC39A13Q96H72 371 aa22.82■■□□□ 1.24
SNF8-216ENST00000573795 CEP63Q96MT8 703 aa22.82■■□□□ 1.24
SNF8-216ENST00000573795 NUCKS1Q9H1E3 243 aaKnown RBP22.82■■□□□ 1.24
SNF8-216ENST00000573795 SGK2Q9HBY8 427 aa22.82■■□□□ 1.24
SNF8-216ENST00000573795 SERGEFQ9UGK8 458 aa22.82■■□□□ 1.24
SNF8-216ENST00000573795 SUN2Q9UH99 717 aa22.82■■□□□ 1.24
SNF8-216ENST00000573795 ACACAQ13085 2346 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms