RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ABCE1P61221 599 aaKnown RBP16.07■□□□□ 0.16
NUP88-207ENST00000573584 DALRD3Q5D0E6 543 aaKnown RBP16.07■□□□□ 0.16
NUP88-207ENST00000573584 NOL9Q5SY16 702 aaKnown RBP16.07■□□□□ 0.16
NUP88-207ENST00000573584 DEFB107AQ8IZN7 70 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 C7orf31Q8N865 590 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 ARNTL2Q8WYA1 636 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 ZDHHC7Q9NXF8 308 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 AKT3Q9Y243 479 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 E2F8A0AVK6 867 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 ZNF195O14628 629 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 GMPRP36959 345 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 CDK7P50613 346 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 ITGA9Q13797 1035 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 INSCQ1MX18 579 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 SFT2D3Q587I9 215 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 ACAD11Q709F0 780 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 PYROXD2Q8N2H3 581 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 ARHGAP18Q8N392 663 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 CENPIQ92674 756 aaPredicted RBP16.07■□□□□ 0.16
NUP88-207ENST00000573584 LPIN3Q9BQK8 851 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 CCDC28BQ9BUN5 200 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 KLHL4Q9C0H6 718 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 VCX3BQ9H321 246 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 GGA3Q9NZ52 723 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 DGKIO75912 1065 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 VTNP04004 478 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 ERVK-10P10266 1014 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 INSRRP14616 1297 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 GSTT1P30711 240 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 SERPINB6P35237 376 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 POU5F1BQ06416 359 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 MED21Q13503 144 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 PEX6Q13608 980 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 KYAT1Q16773 422 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 HACE1Q8IYU2 909 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 NETO2Q8NC67 525 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 JADE3Q92613 823 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 C11orf84Q9BUA3 381 aaPredicted RBP16.06■□□□□ 0.16
NUP88-207ENST00000573584 CEP41Q9BYV8 373 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 ZNF358Q9NW07 568 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 ERAP1Q9NZ08 941 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 POMPQ9Y244 141 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 TXNP10599 105 aaKnown RBP16.06■□□□□ 0.16
NUP88-207ENST00000573584 MX2P20592 715 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 BTKQ06187 659 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 SOWAHAQ2M3V2 549 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 CES3Q6UWW8 571 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 HPS6Q86YV9 775 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 PHTF2Q8N3S3 785 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.06■□□□□ 0.16
NUP88-207ENST00000573584 GDPD5Q8WTR4 605 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 OLFM3Q96PB7 478 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 LOC285556D6RIA3 1793 aa16.06■□□□□ 0.16
NUP88-207ENST00000573584 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.05■□□□□ 0.16
NUP88-207ENST00000573584 HACD1B0YJ81 288 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 DCXO43602 365 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 LCP1P13796 627 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 CPA3P15088 417 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 ALOX15P16050 662 aaPredicted RBP16.05■□□□□ 0.16
NUP88-207ENST00000573584 ITGAXP20702 1163 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 ARL4AP40617 200 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 MLH1P40692 756 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 HARS2P49590 506 aaKnown RBP16.05■□□□□ 0.16
NUP88-207ENST00000573584 DEUP1Q05D60 604 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 NAB1Q13506 487 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 CUL3Q13618 768 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 TCHHL1Q5QJ38 904 aaPredicted RBP16.05■□□□□ 0.16
NUP88-207ENST00000573584 FRMD7Q6ZUT3 714 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 ST13P4Q8IZP2 240 aaPredicted RBP16.05■□□□□ 0.16
NUP88-207ENST00000573584 EFCAB3Q8N7B9 438 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 CAMKK2Q96RR4 588 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 NAT9Q9BTE0 207 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 SYBUQ9NX95 663 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 GTF2IRD1Q9UHL9 959 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 NME7Q9Y5B8 376 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 RNF103O00237 685 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 ADCY6O43306 1168 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 ZMPSTE24O75844 475 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 STK10O94804 968 aaKnown RBP16.05■□□□□ 0.16
NUP88-207ENST00000573584 UQCRBP14927 111 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 PEX2P28328 305 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 AQP4P55087 323 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 LIN52Q52LA3 116 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 SLC26A9Q7LBE3 791 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 TNS4Q8IZW8 715 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 OR6B3Q8NGW1 331 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 CENPKQ9BS16 269 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 SPATA16Q9BXB7 569 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 SEPT10Q9P0V9 454 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 OPHN1O60890 802 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 POLBP06746 335 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 YY1P25490 414 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 TBL3Q12788 808 aaKnown RBP16.05■□□□□ 0.16
NUP88-207ENST00000573584 USP4Q13107 963 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 CNPY1Q3B7I2 92 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 CMC1Q7Z7K0 106 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 FBXW8Q8N3Y1 598 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 PGBD4Q96DM1 585 aa16.05■□□□□ 0.16
NUP88-207ENST00000573584 P2RY11Q96G91 374 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms