RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ANKRD20A8PQ5CZ79 823 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 ALS2CLQ60I27 953 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 LMO3Q8TAP4 145 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 HTR3CQ8WXA8 447 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 ATP6V1E2Q96A05 226 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 ATXN7L3BQ96GX2 97 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 BTN2A3PQ96KV6 586 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 RNF157Q96PX1 679 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 CRTAC1Q9NQ79 661 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 MPP6Q9NZW5 540 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 NOVA2Q9UNW9 492 aaKnown RBP10.4□□□□□ -0.75
SMG6-213ENST00000573166 ANGPTL3Q9Y5C1 460 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 MTMR11A4FU01 709 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 SMAPO00193 183 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 LRCH4O75427 683 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 STAMBPO95630 424 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 POLR2EP19388 210 aaKnown RBP10.39□□□□□ -0.75
SMG6-213ENST00000573166 RFX8Q6ZV50 586 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 CACUL1Q86Y37 369 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 CFAP52Q8N1V2 620 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 TMEM130Q8N3G9 435 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 HJURPQ8NCD3 748 aaPredicted RBP10.39□□□□□ -0.75
SMG6-213ENST00000573166 VPS11Q9H270 941 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 BRD9Q9H8M2 597 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 XAB2Q9HCS7 855 aaKnown RBP10.39□□□□□ -0.75
SMG6-213ENST00000573166 ABCF3Q9NUQ8 709 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 UBA2Q9UBT2 640 aaPredicted RBP10.39□□□□□ -0.75
SMG6-213ENST00000573166 DNPEPQ9ULA0 475 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 CPQQ9Y646 472 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 SDK1Q7Z5N4 2213 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 HGSO14964 777 aaPredicted RBP10.39□□□□□ -0.75
SMG6-213ENST00000573166 BMPR1AP36894 532 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 LAMB3Q13751 1172 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 CCDC85BQ15834 202 aaPredicted RBP10.39□□□□□ -0.75
SMG6-213ENST00000573166 PREPLQ4J6C6 727 aaPredicted RBP10.39□□□□□ -0.75
SMG6-213ENST00000573166 FNIP1Q8TF40 1166 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 ZNF669Q96BR6 464 aaPredicted RBP10.39□□□□□ -0.75
SMG6-213ENST00000573166 DCUN1D1Q96GG9 259 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 MCM3APO60318 1980 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 GJB5O95377 273 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 AKT1P31749 480 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 CYP4F8P98187 520 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 E2F5Q15329 346 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 TAC4Q86UU9 113 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 RASSF3Q86WH2 238 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 COLGALT2Q8IYK4 626 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 DCLK2Q8N568 766 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 SCG3Q8WXD2 468 aaKnown RBP10.39□□□□□ -0.75
SMG6-213ENST00000573166 EXT2Q93063 718 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 TOP1MTQ969P6 601 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 RIPOR3Q96MK2 946 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 PKP3Q9Y446 797 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 DOCK3Q8IZD9 2030 aa10.39□□□□□ -0.75
SMG6-213ENST00000573166 RNF103O00237 685 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 GJA1P17302 382 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 RBL1P28749 1068 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 KYNUQ16719 465 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 KLC3Q6P597 504 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 RNF19BQ6ZMZ0 732 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 C15orf39Q6ZRI6 1047 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 RAB44Q7Z6P3 723 aaPredicted RBP10.38□□□□□ -0.75
SMG6-213ENST00000573166 NAT16Q8N8M0 369 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 TMEM209Q96SK2 561 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 CYTH2Q99418 400 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 DDX23Q9BUQ8 820 aaKnown RBP10.38□□□□□ -0.75
SMG6-213ENST00000573166 FOXP3Q9BZS1 431 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 BRD8Q9H0E9 1235 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 PRDM12Q9H4Q4 367 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 C10orf88Q9H8K7 445 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 INTS9Q9NV88 658 aaKnown RBP10.38□□□□□ -0.75
SMG6-213ENST00000573166 NDFIP2Q9NV92 336 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 NDUFAB1O14561 156 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 TBX18O95935 607 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 ITGB1P05556 798 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 POLBP06746 335 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 GPR15P49685 360 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 FNDC3BQ53EP0 1204 aaKnown RBP10.38□□□□□ -0.75
SMG6-213ENST00000573166 RTP2Q5QGT7 225 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 CCDC121Q6ZUS5 278 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 ALG3Q92685 438 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 SAMD11Q96NU1 681 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 ZNF670Q9BS34 389 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 MAN1C1Q9NR34 630 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 CHST7Q9NS84 486 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 TBC1D14Q9P2M4 693 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 SEPT3Q9UH03 358 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 GON4LQ3T8J9 2241 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 C2CD4BA6NLJ0 364 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 A6NNZ2 444 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 RASA4BC9J798 803 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 RASA4O43374 803 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 PTPN9P43378 593 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 PPP3CCP48454 512 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 SETDB1Q15047 1291 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 TUBB8Q3ZCM7 444 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 RFWD3Q6PCD5 774 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 NPNTQ6UXI9 565 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 ANKRD33Q7Z3H0 272 aa10.38□□□□□ -0.75
SMG6-213ENST00000573166 SRRM1Q8IYB3 904 aaKnown RBP10.38□□□□□ -0.75
SMG6-213ENST00000573166 TTC8Q8TAM2 541 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms