RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 USP30Q70CQ3 517 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 ADAT2Q7Z6V5 191 aaKnown RBP10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 UNC45BQ8IWX7 931 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 SCUBE3Q8IX30 993 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 SCML4Q8N228 414 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 PDCD7Q8N8D1 485 aaKnown RBP10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 ZNF557Q8N988 423 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 UBA3Q8TBC4 463 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 EEF2KMTQ96G04 330 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 LRIG1Q96JA1 1093 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 SPATA32Q96LK8 384 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 ORAI3Q9BRQ5 295 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 RSPH9Q9H1X1 276 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 CNGB3Q9NQW8 809 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 SCML1Q9UN30 329 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 NCKAP1Q9Y2A7 1128 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 COQ4Q9Y3A0 265 aa10.27□□□□□ -0.77
TRAPPC1-205ENST00000572656 A0A087WV48 116 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 FAM149AA5PLN7 773 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 E9PAM4 449 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 O00370 1275 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 VILLO15195 856 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 TBL1XO60907 577 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 RNASEH1O60930 286 aaKnown RBP10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 IGLV3-27P01718 113 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 LCP1P13796 627 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 SLC11A2P49281 568 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 C21orf59P57076 290 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 DAOAP59103 153 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 RACK1P63244 317 aaKnown RBP10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 SFSWAPQ12872 951 aaKnown RBP10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 CBWD6Q4V339 395 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 PKDCCQ504Y2 493 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 CBWD3Q5JTY5 395 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 CBWD5Q5RIA9 395 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 NUGGCQ68CJ6 796 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 KIAA0895LQ68EN5 471 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 MSANTD2Q6P1R3 559 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 RFWD3Q6PCD5 774 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 KRBA2Q6ZNG9 492 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 FIBINQ8TAL6 211 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 WFDC5Q8TCV5 224 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 GANCQ8TET4 914 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 IRGQQ8WZA9 623 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 AZIN2Q96A70 460 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 TTC17Q96AE7 1141 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 MYO19Q96H55 970 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 LMLNQ96KR4 655 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 ACE2Q9BYF1 805 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 PABPC3Q9H361 631 aaKnown RBP10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 FTSJ1Q9UET6 329 aa10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 MYO18AQ92614 2054 aaKnown RBP10.26□□□□□ -0.77
TRAPPC1-205ENST00000572656 PI4KAP42356 2102 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 A0A1B0GTQ1 180 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 GOLGA6L7A0A1B0GV03 622 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 A0A1W2PPC4 97 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 SLC16A3O15427 465 aaKnown RBP10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 ACSL4O60488 711 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 ASLP04424 464 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 SLC6A4P31645 630 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 GALCP54803 685 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 ST8SIA6P61647 398 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 KRT85P78386 507 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 IL9RQ01113 521 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 ARID5BQ14865 1188 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 HNRNPA1L2Q32P51 320 aaKnown RBP10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 CCDC157Q569K6 752 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 FAM133BQ5BKY9 247 aaKnown RBP10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 DCAF17Q5H9S7 520 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 TCERG1LQ5VWI1 586 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 LCLAT1Q6UWP7 414 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 DHRS13Q6UX07 377 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 TMPRSS12Q86WS5 348 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 MFN1Q8IWA4 741 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 SMYD4Q8IYR2 804 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 UBR7Q8N806 425 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 KDM1BQ8NB78 822 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 HJURPQ8NCD3 748 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 SLC35F5Q8WV83 523 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 SKA1Q96BD8 255 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 BBC3Q96PG8 261 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 ELF4Q99607 663 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 MTG2Q9H4K7 406 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 FBXL12Q9NXK8 326 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 STIM2Q9P246 746 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 ADAMTS1Q9UHI8 967 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 PCDHGA1Q9Y5H4 931 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 IGSF10Q6WRI0 2623 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 CEP192Q8TEP8 1941 aa10.25□□□□□ -0.77
TRAPPC1-205ENST00000572656 FASNP49327 2511 aaKnown RBP10.24□□□□□ -0.77
TRAPPC1-205ENST00000572656 A0A1W2PQ27 194 aa10.24□□□□□ -0.77
TRAPPC1-205ENST00000572656 A0A1W2PQ64 194 aa10.24□□□□□ -0.77
TRAPPC1-205ENST00000572656 TARSL2A2RTX5 802 aaKnown RBP10.24□□□□□ -0.77
TRAPPC1-205ENST00000572656 TYW5A2RUC4 315 aaKnown RBP10.24□□□□□ -0.77
TRAPPC1-205ENST00000572656 FAM47DPA6NHR8 397 aa10.24□□□□□ -0.77
TRAPPC1-205ENST00000572656 LRRC72A6NJI9 287 aa10.24□□□□□ -0.77
TRAPPC1-205ENST00000572656 EIF4E1BA6NMX2 242 aaKnown RBP10.24□□□□□ -0.77
TRAPPC1-205ENST00000572656 SIN3BO75182 1162 aa10.24□□□□□ -0.77
TRAPPC1-205ENST00000572656 GABBR2O75899 941 aa10.24□□□□□ -0.77
TRAPPC1-205ENST00000572656 ZNF202O95125 648 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms