RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TCRBV21S2A2A0A5A6 115 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 FAM92AA1XBS5 289 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 SCAMP3O14828 347 aaKnown RBP13.87□□□□□ -0.19
CCDC40-205ENST00000571028 ZBTB24O43167 697 aaPredicted RBP13.87□□□□□ -0.19
CCDC40-205ENST00000571028 PAPSS1O43252 624 aaPredicted RBP13.87□□□□□ -0.19
CCDC40-205ENST00000571028 MFAP3LO75121 409 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 FBXO21O94952 628 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 LSM8O95777 96 aaKnown RBP13.87□□□□□ -0.19
CCDC40-205ENST00000571028 OAS1P00973 400 aaKnown RBP13.87□□□□□ -0.19
CCDC40-205ENST00000571028 CYP1A1P04798 512 aaPredicted RBP13.87□□□□□ -0.19
CCDC40-205ENST00000571028 HMBSP08397 361 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 ZDHHC11BP0C7U3 371 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 TIE1P35590 1138 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 NSFP46459 744 aaKnown RBP13.87□□□□□ -0.19
CCDC40-205ENST00000571028 SNX16P57768 344 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 RNASE9P60153 205 aaKnown RBP13.87□□□□□ -0.19
CCDC40-205ENST00000571028 EFEMP1Q12805 493 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 TAF5Q15542 800 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 CLEC16AQ2KHT3 1053 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 HSF5Q4G112 596 aaPredicted RBP13.87□□□□□ -0.19
CCDC40-205ENST00000571028 PM20D1Q6GTS8 502 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 TMEM92Q6UXU6 159 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 TRIM72Q6ZMU5 477 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 FAM183BPQ6ZVS7 135 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 TMEM110Q86TL2 294 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 MSANTD4Q8NCY6 345 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 OR8K1Q8NGG5 319 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 RNF139Q8WU17 664 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 C18orf8Q96DM3 657 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 TAS2R14Q9NYV8 317 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 RAXQ9Y2V3 346 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 CPQQ9Y646 472 aa13.87□□□□□ -0.19
CCDC40-205ENST00000571028 ARHGAP33O14559 1287 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 CAPN9O14815 690 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 LTFP02788 710 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 APODP05090 189 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 SERPING1P05155 500 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 FTH1P19P0C7X4 201 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 CDH5P33151 784 aaPredicted RBP13.86□□□□□ -0.19
CCDC40-205ENST00000571028 ATP5C1P36542 298 aaKnown RBP13.86□□□□□ -0.19
CCDC40-205ENST00000571028 OPRD1P41143 372 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 PRKCIP41743 596 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 TBX2Q13207 712 aaPredicted RBP13.86□□□□□ -0.19
CCDC40-205ENST00000571028 SLC36A4Q6YBV0 504 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 BHLHA9Q7RTU4 235 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 DEFB119Q8N690 84 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 FRMD1Q8N878 549 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 MDM1Q8TC05 714 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 ADAMTS14Q8WXS8 1223 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 IRGQQ8WZA9 623 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 SYN2Q92777 582 aaPredicted RBP13.86□□□□□ -0.19
CCDC40-205ENST00000571028 PIWIL1Q96J94 861 aaKnown RBP13.86□□□□□ -0.19
CCDC40-205ENST00000571028 PNKPQ96T60 521 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 LINC00597Q9H2U6 94 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 GRPEL1Q9HAV7 217 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 ABHD10Q9NUJ1 306 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCDC40-205ENST00000571028 SFMBT1Q9UHJ3 866 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 APOBEC2Q9Y235 224 aaKnown RBP13.86□□□□□ -0.19
CCDC40-205ENST00000571028 NUP205Q92621 2012 aa13.86□□□□□ -0.19
CCDC40-205ENST00000571028 SLC12A8A0AV02 714 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 SGK1O00141 431 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 DDX3XO00571 662 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC40-205ENST00000571028 CAPNS1P04632 268 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 NCAM1P13591 858 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 EIF4A3P38919 411 aaKnown RBP13.85□□□□□ -0.19
CCDC40-205ENST00000571028 RPL34P49207 117 aaKnown RBP13.85□□□□□ -0.19
CCDC40-205ENST00000571028 PSEN1P49768 467 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 SLC14A1Q13336 389 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 MAP7D1Q3KQU3 841 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 FAM102AQ5T9C2 384 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-205ENST00000571028 PEAR1Q5VY43 1037 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-205ENST00000571028 HGSNATQ68CP4 663 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 ACAD10Q6JQN1 1059 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 CCNI2Q6ZMN8 369 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-205ENST00000571028 VPS36Q86VN1 386 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 CNGA4Q8IV77 575 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 PNPLA1Q8N8W4 532 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 IL17RCQ8NAC3 791 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 OR2I1PQ8NGU4 316 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 CAMK1GQ96NX5 476 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 DEF6Q9H4E7 631 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 CAPN10Q9HC96 672 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 CYLDQ9NQC7 956 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 CLIC5Q9NZA1 410 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 ADAM22Q9P0K1 906 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 CFAP97Q9P2B7 532 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 ADAMTS1Q9UHI8 967 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 ARHGAP26Q9UNA1 814 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 NAALADL1Q9UQQ1 740 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 BZW2Q9Y6E2 419 aaKnown RBP13.85□□□□□ -0.19
CCDC40-205ENST00000571028 ATG2BQ96BY7 2078 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 ADAMTS20P59510 1910 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 LOC400499M0QZD8 3231 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 THADAQ6YHU6 1953 aa13.85□□□□□ -0.19
CCDC40-205ENST00000571028 SYNJ2BP-COX16A0A087WUM0 186 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 LEFTY2O00292 366 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 SART1O43290 800 aaKnown RBP13.84□□□□□ -0.19
CCDC40-205ENST00000571028 SH3BP5O60239 455 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 KAT7O95251 611 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms