RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 C1orf74Q96LT6 269 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 DDX50Q9BQ39 737 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 CARD6Q9BX69 1037 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 ARHGEF4Q9NR80 690 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 TDP1Q9NUW8 608 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 CD207Q9UJ71 328 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 AGO1Q9UL18 857 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 CCL26Q9Y258 94 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 EFR3BQ9Y2G0 817 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 NOTCH4Q99466 2003 aa15.93■□□□□ 0.14
HERPUD1-219ENST00000570273 C2orf16Q68DN1 1984 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 DENND4CQ5VZ89 1909 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 DOCK6Q96HP0 2047 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 GOLGA6L10A0A0M3HER8 536 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 GOLGA6L7A0A1B0GV03 622 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 F5H5T6 163 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 KRIT1O00522 736 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 APOL1O14791 398 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 CST8O60676 142 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 AMPD1P23109 780 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 EPHB2P29323 1055 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 ADCY2Q08462 1091 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 USP4Q13107 963 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 DPYSQ14117 519 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 SKIV2LQ15477 1246 aaKnown RBP15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 CCDC85BQ15834 202 aaPredicted RBP15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 MANEALQ5VSG8 457 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 Q6ZNB5 142 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 BBS12Q6ZW61 710 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 ARID3BQ8IVW6 561 aaPredicted RBP15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 LGI2Q8N0V4 545 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 PQLC3Q8N755 202 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 FGF13Q92913 245 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 PRMT1Q99873 361 aaKnown RBP15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 AP1M1Q9BXS5 423 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 KIF9Q9HAQ2 790 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 STIM2Q9P246 746 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 VANGL2Q9ULK5 521 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 ZNF510Q9Y2H8 683 aa15.92■□□□□ 0.14
HERPUD1-219ENST00000570273 CTAGE15A4D2H0 777 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 GREM1O60565 184 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 CTAGE8P0CG41 777 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 ZFXP17010 805 aaPredicted RBP15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 HOXC13P31276 330 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 HCAR3P49019 387 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 KLF1Q13351 362 aaPredicted RBP15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 ZNF77Q15935 545 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 FAM133BQ5BKY9 247 aaKnown RBP15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 SLC9A4Q6AI14 798 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 POTEHQ6S545 545 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 CTAGE6Q86UF2 777 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 CTAGE4Q8IX94 777 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 SMRP1Q8NCR6 262 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 HAUS1Q96CS2 278 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 RPRD1AQ96P16 312 aaPredicted RBP15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 GDE1Q9NZC3 331 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 CDH7Q9ULB5 785 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 NEU3Q9UQ49 428 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 XIRP2A4UGR9 3374 aa15.91■□□□□ 0.14
HERPUD1-219ENST00000570273 E2F8A0AVK6 867 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 H3BQ06 376 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 FGF10O15520 208 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 SLC34A2O95436 690 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 ERCC2P18074 760 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 WEE1P30291 646 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 SLC6A4P31645 630 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 GBP2P32456 591 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 C2orf54Q08AI8 447 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 SIX1Q15475 284 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 FAM78AQ5JUQ0 283 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 ADGRF1Q5T601 910 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 FBXL22Q6P050 247 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 RFWD3Q6PCD5 774 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 HTR3DQ70Z44 454 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 ZNF572Q7Z3I7 529 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 BBS7Q8IWZ6 715 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 ZNF683Q8IZ20 524 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 PPM1EQ8WY54 764 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 SMARCD2Q92925 531 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 NECTIN4Q96NY8 510 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 POMKQ9H5K3 350 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 CATSPERBQ9H7T0 1116 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 UBE2ZQ9H832 354 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 PRDM16Q9HAZ2 1276 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 ETNK2Q9NVF9 386 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 STOML2Q9UJZ1 356 aa15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 R3HDM2Q9Y2K5 976 aaKnown RBP15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 USP15Q9Y4E8 981 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-219ENST00000570273 APOC4-APOC2K7ER74 178 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 TRDMT1O14717 391 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 RIOK3O14730 519 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 DCLK1O15075 740 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 APOC2P02655 101 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 TCF3P15923 654 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 TGM2P21980 687 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 VCPP55072 806 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 RABGAP1LQ5R372 815 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 NCBP2-AS2Q69YL0 99 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 C1orf228Q6PIY5 440 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 TMCO3Q6UWJ1 677 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms