RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 COL23A1Q86Y22 540 aaPredicted RBP5.34□□□□□ -1.55
CHD9-220ENST00000569794 RFX6Q8HWS3 928 aa5.34□□□□□ -1.55
CHD9-220ENST00000569794 DENND1CQ8IV53 801 aa5.34□□□□□ -1.55
CHD9-220ENST00000569794 TTC14Q96N46 770 aa5.34□□□□□ -1.55
CHD9-220ENST00000569794 FCRL5Q96RD9 977 aa5.34□□□□□ -1.55
CHD9-220ENST00000569794 SEC62Q99442 399 aaKnown RBP5.34□□□□□ -1.55
CHD9-220ENST00000569794 OSBPL5Q9H0X9 879 aaPredicted RBP5.34□□□□□ -1.55
CHD9-220ENST00000569794 BLOC1S4Q9NUP1 217 aa5.34□□□□□ -1.55
CHD9-220ENST00000569794 SEMA5BQ9P283 1151 aa5.34□□□□□ -1.55
CHD9-220ENST00000569794 COG5Q9UP83 839 aa5.34□□□□□ -1.55
CHD9-220ENST00000569794 CRYL1Q9Y2S2 319 aa5.34□□□□□ -1.55
CHD9-220ENST00000569794 PAXBP1Q9Y5B6 917 aa5.34□□□□□ -1.55
CHD9-220ENST00000569794 ITIH6Q6UXX5 1313 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 TMEM272A0A1B0GTI8 110 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 A0A1B0GVC2 190 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 H3BML4 177 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 H7C4K7 107 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 GOLIM4O00461 696 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 PRAMEF2O60811 474 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 PARP1P09874 1014 aaKnown RBP5.33□□□□□ -1.56
CHD9-220ENST00000569794 HOXB2P14652 356 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 ADRA1DP25100 572 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 PEX2P28328 305 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 ARRB2P32121 409 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 PTDSS1P48651 473 aaKnown RBP5.33□□□□□ -1.56
CHD9-220ENST00000569794 PRIM2P49643 509 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 BLMHQ13867 455 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 TAF12Q16514 161 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 DGKKQ5KSL6 1271 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 ZNF324BQ6AW86 544 aaPredicted RBP5.33□□□□□ -1.56
CHD9-220ENST00000569794 RETSATQ6NUM9 610 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 C4orf50Q6ZRC1 276 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 DPP9Q86TI2 863 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 HDAC2Q92769 488 aaKnown RBP5.33□□□□□ -1.56
CHD9-220ENST00000569794 KIAA1191Q96A73 305 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 TBC1D20Q96BZ9 403 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 SERINC2Q96SA4 455 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 AP1M1Q9BXS5 423 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 ARHGAP39Q9C0H5 1083 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 ARL8BQ9NVJ2 186 aa5.33□□□□□ -1.56
CHD9-220ENST00000569794 SPATA31A1Q5TZJ5 1347 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 SLC22A23A1A5C7 686 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 IFITM10A6NMD0 228 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 KPNA5O15131 536 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 SPTLC2O15270 562 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 DHX16O60231 1041 aaKnown RBP5.32□□□□□ -1.56
CHD9-220ENST00000569794 MGEA5O60502 916 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 TUSC2O75896 110 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 UBXN7O94888 489 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 CD4P01730 458 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 HSP90AB1P08238 724 aaKnown RBP5.32□□□□□ -1.56
CHD9-220ENST00000569794 CD19P15391 556 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 CAPN3P20807 821 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 TNFSF4P23510 183 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 HOXA7P31268 230 aaPredicted RBP5.32□□□□□ -1.56
CHD9-220ENST00000569794 ADD2P35612 726 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 ZBED6P86452 979 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 ICA1Q05084 483 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 PRKG2Q13237 762 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 ST3GAL2Q16842 350 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 CCDC92Q53HC0 331 aaPredicted RBP5.32□□□□□ -1.56
CHD9-220ENST00000569794 INTS11Q5TA45 600 aaKnown RBP5.32□□□□□ -1.56
CHD9-220ENST00000569794 RNF220Q5VTB9 566 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 CAPRIN2Q6IMN6 1127 aaKnown RBP5.32□□□□□ -1.56
CHD9-220ENST00000569794 TFAP2DQ7Z6R9 452 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 TBC1D1Q86TI0 1168 aaPredicted RBP5.32□□□□□ -1.56
CHD9-220ENST00000569794 FAM71DQ8N9W8 422 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 SLC44A5Q8NCS7 719 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 MSI2Q96DH6 328 aaKnown RBP5.32□□□□□ -1.56
CHD9-220ENST00000569794 ZBTB10Q96DT7 871 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 TUBB6Q9BUF5 446 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 B3GNT5Q9BYG0 378 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 NUP62CLQ9H1M0 184 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 TMEM60Q9H2L4 133 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 ISY1Q9ULR0 285 aaKnown RBP5.32□□□□□ -1.56
CHD9-220ENST00000569794 MAGED2Q9UNF1 606 aaPredicted RBP5.32□□□□□ -1.56
CHD9-220ENST00000569794 CORO2BQ9UQ03 480 aa5.32□□□□□ -1.56
CHD9-220ENST00000569794 A0A087WV62 115 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 RHPN2P1A8MT19 583 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 TMCC2O75069 709 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 GFPT2O94808 682 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 BAIAP3O94812 1187 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 TBXAS1P24557 533 aaPredicted RBP5.31□□□□□ -1.56
CHD9-220ENST00000569794 KRT9P35527 623 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 KRT20P35900 424 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 PIK3CBP42338 1070 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 ITGA8P53708 1063 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 CACNB3P54284 484 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 P2RX3P56373 397 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 TXNL4AP83876 142 aaKnown RBP5.31□□□□□ -1.56
CHD9-220ENST00000569794 MPP1Q00013 466 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 PPATQ06203 517 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 ITPRIPL1Q6GPH6 555 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 GGT6Q6P531 493 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 GSG1LQ6UXU4 331 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 CYP26C1Q6V0L0 522 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 ZSCAN30Q86W11 494 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 MICU3Q86XE3 530 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 CHCHD4Q8N4Q1 142 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 C11orf44Q8N8P7 122 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms