RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 TFB1MQ8WVM0 346 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 CELF6Q96J87 481 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 ZNF512Q96ME7 567 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 RAD9AQ99638 391 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 SH3GL2Q99962 352 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 PABPC3Q9H361 631 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 COMMD8Q9NX08 183 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 NYNRINQ9P2P1 1898 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 F5H423 210 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 MYOGP15173 224 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 AP1B1Q10567 949 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 FASTKD3Q14CZ7 662 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 NAT8LQ8N9F0 302 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 ARL8AQ96BM9 186 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 NDFIP2Q9NV92 336 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 INSL5Q9Y5Q6 135 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 CFAP69A5D8W1 941 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 POLR3GO15318 223 aaPredicted RBP11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 ALDH1A3P47895 512 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 ZNF844Q08AG5 666 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 SLC29A2Q14542 456 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 TRIP4Q15650 581 aaPredicted RBP11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 HEATR6Q6AI08 1181 aaKnown RBP11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 CCNYQ8ND76 341 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 RUFY1Q96T51 708 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 KLC2Q9H0B6 622 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 MPP6Q9NZW5 540 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 SHOC2Q9UQ13 582 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 ZNF840PA6NDX5 716 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 E9PAM4 449 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 RIPK2O43353 540 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 TGM5O43548 720 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 ACSL3O95573 720 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 DNAJB1P25685 340 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 CTNNB1P35222 781 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 KCNQ1P51787 676 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 GYS2P54840 703 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 ERVFC1P60507 584 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 SLMAPQ14BN4 828 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 FAM109BQ6ICB4 259 aaPredicted RBP11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 PPIL6Q8IXY8 311 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 HTR3CQ8WXA8 447 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 P2RY11Q96G91 374 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 RBM15Q96T37 977 aaKnown RBP eCLIP11.26□□□□□ -0.616e-7■■■■■ 36.2
PDXDC1-216ENST00000569715 RXFP1Q9HBX9 757 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 RAB6BQ9NRW1 208 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 OLA1Q9NTK5 396 aaKnown RBP11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 FNIP2Q9P278 1114 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 HSFX1Q9UBD0 423 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 VANGL2Q9ULK5 521 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 DOCK6Q96HP0 2047 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 RNF40O75150 1001 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 METTL18O95568 372 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 IGLV3-27P01718 113 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 CSH1P0DML2 217 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 CSH2P0DML3 217 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 TTMPQ5BVD1 217 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 MS4A13Q5J8X5 152 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 CEP85LQ5SZL2 805 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 TCEAL8Q8IYN2 117 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 C9orf72Q96LT7 481 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 C17orf80Q9BSJ5 609 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 ZNF334Q9HCZ1 680 aaPredicted RBP11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 MED4Q9NPJ6 270 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 SEPT10Q9P0V9 454 aa11.26□□□□□ -0.61
PDXDC1-216ENST00000569715 GRXCR1A8MXD5 290 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 KCNK1O00180 336 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 HOXC13P31276 330 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 GPS2Q13227 327 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 KCNJ11Q14654 390 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 PDK1Q15118 436 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 KYNUQ16719 465 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 MSS51Q4VC12 460 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 HSP90B2PQ58FF3 399 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 FNBP1LQ5T0N5 605 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 TMC7Q7Z402 723 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 ZNF683Q8IZ20 524 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 TBC1D31Q96DN5 1066 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 MYEOVQ96EZ4 313 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 PRDM16Q9HAZ2 1276 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 SAYSD1Q9NPB0 183 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 NINJ2Q9NZG7 142 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 PAK5Q9P286 719 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 CARNS1A5YM72 827 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 C2orf78A6NCI8 922 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 HIDE1A8MVS5 230 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 HACD1B0YJ81 288 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 RNF103O00237 685 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 COCHO43405 550 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 CXCL14O95715 111 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 APOEP02649 317 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 ELF1P32519 619 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 TUBP50607 506 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 MLLT6P55198 1093 aaPredicted RBP11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 DENND2CQ68D51 928 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 ARHGAP36Q6ZRI8 547 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms