RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 NSRP1Q9H0G5 558 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 OSBPL2Q9H1P3 480 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 VPS11Q9H270 941 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 RABEP2Q9H5N1 569 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ACTR5Q9H9F9 607 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 XAB2Q9HCS7 855 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 WDR6Q9NNW5 1121 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 KCNK9Q9NPC2 374 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 EIF2B3Q9NR50 452 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ARHGEF4Q9NR80 690 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 DTLQ9NZJ0 730 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 CTNNAL1Q9UBT7 734 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PRKAG3Q9UGI9 489 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ZNF180Q9UJW8 692 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PCDHB3Q9Y5E6 796 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 HEY1Q9Y5J3 304 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PDCD11Q14690 1871 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 TRIP11Q15643 1979 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 IQANK1A0A1B0GTG1 560 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 TCRBV9S1A1TA0A576 114 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 SDR42E2A6NKP2 422 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 YJEFN3A6XGL0 299 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 TCP11X1B4DZS4 312 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 E7ENQ6 273 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 GOLGA8MH3BSY2 632 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 TMEM189-UBE2V1I3L0A0 370 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 DCLK1O15075 740 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 TM9SF1O15321 606 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 MTSS1O43312 755 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 KIAA0754O94854 1291 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 OAZ2O95190 189 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ZWINTO95229 277 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 METTL18O95568 372 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 OAS1P00973 400 aaKnown RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 IGLV3-25P01717 112 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 LTFP02788 710 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 VIMP08670 466 aaKnown RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ELNP15502 786 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 GOT1P17174 413 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 KRT15P19012 456 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 CCND3P30281 292 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 WEE1P30291 646 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 CD52P31358 61 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 FOXN2P32314 431 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 STX2P32856 288 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 HTR7P34969 479 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ACLYP53396 1101 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 PRMT2P55345 433 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 BASP1P80723 227 aaKnown RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 DEUP1Q05D60 604 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ACTN3Q08043 901 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 DSC1Q08554 894 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 WASHC5Q12768 1159 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 DNAJC3Q13217 504 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 FRG1Q14331 258 aaKnown RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 SPARCL1Q14515 664 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ARHGEF6Q15052 776 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ARL13BQ3SXY8 428 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ANKRD20A2Q5SQ80 823 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 HP1BP3Q5SSJ5 553 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 LGSNQ5TDP6 509 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ANKRD20A1Q5TYW2 823 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ANKRD20A3Q5VUR7 823 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 STEAP4Q687X5 459 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 NUGGCQ68CJ6 796 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 LRRC8BQ6P9F7 803 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ZNF449Q6P9G9 518 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 TIFABQ6ZNK6 161 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 RFX8Q6ZV50 586 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 HFE2Q6ZVN8 426 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 SLC24A5Q71RS6 500 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 RNF180Q86T96 592 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 RTN4RL1Q86UN2 441 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 FAM35AQ86V20 835 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 SLC26A11Q86WA9 606 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 FAM131BQ86XD5 332 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 KLHDC8BQ8IXV7 354 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 SRRM1Q8IYB3 904 aaKnown RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 VPS52Q8N1B4 723 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 THEM5Q8N1Q8 247 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 AGGF1Q8N302 714 aaeCLIP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ZNF276Q8N554 614 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 BANPQ8N9N5 519 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 CCDC110Q8TBZ0 833 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 RAET1EQ8TD07 263 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 DYDC1Q8WWB3 177 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 NDRG1Q92597 394 aaKnown RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 TTC17Q96AE7 1141 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 FAM149B1Q96BN6 582 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 SMC6Q96SB8 1091 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 KCNK16Q96T55 309 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 EBNA1BP2Q99848 306 aaKnown RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ELAC2Q9BQ52 826 aaKnown RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 NAT9Q9BTE0 207 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 COLEC11Q9BWP8 271 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 OSBPL7Q9BZF2 842 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 ULBP1Q9BZM6 244 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 PRDM9Q9NQV7 894 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 KRT82Q9NSB4 513 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 PIGVQ9NUD9 493 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms