RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ASLP04424 464 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 ITGB2P05107 769 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 PABPC1P11940 636 aaKnown RBP9.05□□□□□ -0.96
SMG1-216ENST00000569122 CKMT1AP12532 417 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 CASP5P51878 434 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 KIF11P52732 1056 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 CYP24A1Q07973 514 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 EFEMP1Q12805 493 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 BIRC3Q13489 604 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 STAT4Q14765 748 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 SGSM1Q2NKQ1 1148 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 ARL13BQ3SXY8 428 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 MPP7Q5T2T1 576 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 NAPEPLDQ6IQ20 393 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 CCDC73Q6ZRK6 1079 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 CCDC117Q8IWD4 279 aaPredicted RBP9.05□□□□□ -0.96
SMG1-216ENST00000569122 FAM217AQ8IXS0 508 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 ARL14Q8N4G2 192 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 XXYLT1Q8NBI6 393 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 RDH13Q8NBN7 331 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 OR4C6Q8NH72 309 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 TPCN2Q8NHX9 752 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 CYB5D2Q8WUJ1 264 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 TAF4BQ92750 862 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 CCDC127Q96BQ5 260 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 SLC46A1Q96NT5 459 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 CCNL2Q96S94 520 aaPredicted RBP9.05□□□□□ -0.96
SMG1-216ENST00000569122 DUSP23Q9BVJ7 150 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 XYLT2Q9H1B5 865 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 NEUROG2Q9H2A3 272 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 SMYD3Q9H7B4 428 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 NMUR1Q9HB89 426 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 OLA1Q9NTK5 396 aaKnown RBP9.05□□□□□ -0.96
SMG1-216ENST00000569122 MARCH2Q9P0N8 246 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 CGNQ9P2M7 1197 aaKnown RBP9.05□□□□□ -0.96
SMG1-216ENST00000569122 GGA2Q9UJY4 613 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 NUDT5Q9UKK9 219 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 PCDHB1Q9Y5F3 818 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 PCDHGA8Q9Y5G5 932 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 TCHHQ07283 1943 aa9.05□□□□□ -0.96
SMG1-216ENST00000569122 TBC1D3DA0A087WVF3 549 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 TBC1D3IA0A087WXS9 549 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 TBC1D3EA0A087X179 549 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 TBC1D3KA0A087X1G2 549 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 A0A1W2PP55 124 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 SLC12A8A0AV02 714 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 TBC1D3FA6NER0 549 aaPredicted RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 TBC1D3LB9A6J9 549 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 EIF3DO15371 548 aaKnown RBP eCLIP9.04□□□□□ -0.96
SMG1-216ENST00000569122 SUV39H1O43463 412 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 LZTS3O60299 673 aaPredicted RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 RNGTTO60942 597 aaKnown RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 CSO75390 466 aaKnown RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 GJB6O95452 261 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 ADH1BP00325 375 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 RPN1P04843 607 aaKnown RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 HMBSP08397 361 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 TBC1D3HP0C7X1 549 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 CCDC130P13994 396 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 GOT1P17174 413 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 C5AR1P21730 350 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 HOXD9P28356 352 aaPredicted RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 HLA-FP30511 346 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 SLC8A1P32418 973 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 SLC8A3P57103 927 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 NCOA4Q13772 614 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 UBAP2LQ14157 1087 aaKnown RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 ARID5BQ14865 1188 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 CST6Q15828 149 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 HNRNPA1L2Q32P51 320 aaKnown RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 KIAA1614Q5VZ46 1190 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 MBLAC2Q68D91 279 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 TBC1D3GQ6DHY5 549 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 TBC1D3CQ6IPX1 549 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 KANSL1Q7Z3B3 1105 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 KIAA0907Q7Z7F0 614 aaPredicted RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 ADIPOR2Q86V24 386 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 TBC1D3Q8IZP1 549 aaPredicted RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 OR14C36Q8NHC7 312 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 CYFIP2Q96F07 1278 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 SEMA3CQ99985 751 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 SRRTQ9BXP5 876 aaKnown RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 GZF1Q9H116 711 aaPredicted RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 ASCL3Q9NQ33 180 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 STARD5Q9NSY2 213 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 ABCB8Q9NUT2 735 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 TJP2Q9UDY2 1190 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 CLEC4EQ9ULY5 219 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 USP3Q9Y6I4 520 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 MYOFQ9NZM1 2061 aa9.04□□□□□ -0.96
SMG1-216ENST00000569122 MUC22E2RYF6 1773 aaPredicted RBP9.04□□□□□ -0.96
SMG1-216ENST00000569122 TYW5A2RUC4 315 aaKnown RBP9.03□□□□□ -0.96
SMG1-216ENST00000569122 HHLA1C9JL84 531 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 PRAMEF26H0Y7S4 382 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 MID1O15344 667 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 IRAK2O43187 625 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 LATO43561 262 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 PRR29P0C7W0 189 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 ADORA2BP29275 332 aa9.03□□□□□ -0.96
SMG1-216ENST00000569122 NDST1P52848 882 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms