RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782		A0A1W2PQF6	199 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	BCLAF3	A2AJT9	711 aa	Known RBP	10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	ANTXRL	A6NF34	631 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	WASH3P	C4AMC7	463 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782		F8VZ95	297 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782		M0QYT0	321 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	RNASEH1	O60930	286 aa	Known RBP	10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	GRAP2	O75791	330 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	GFPT2	O94808	682 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	ASL	P04424	464 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	FYN	P06241	537 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	DLD	P09622	509 aa	Known RBP	10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	PNMA6A	P0CW24	399 aa	Predicted RBP	10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	NDUFV2	P19404	249 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	HLA-F	P30511	346 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	OXTR	P30559	389 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	MATK	P42679	507 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	IL12RB1	P42701	662 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	ATXN3	P54252	364 aa	Predicted RBP	10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	TYRO3	Q06418	890 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	CCDC6	Q16204	474 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	MS4A13	Q5J8X5	152 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	FAM102A	Q5T9C2	384 aa	Predicted RBP	10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	LYSMD4	Q5XG99	296 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	RAP1GAP2	Q684P5	730 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	MBLAC2	Q68D91	279 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	CAVIN1	Q6NZI2	390 aa	Known RBP	10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	TRIM72	Q6ZMU5	477 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	SLC26A9	Q7LBE3	791 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	TMPRSS6	Q8IU80	811 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	TMEFF1	Q8IYR6	380 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	RGL4	Q8IZJ4	473 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	WDTC1	Q8N5D0	677 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	OLIG1	Q8TAK6	271 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	FIBIN	Q8TAL6	211 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	CEP76	Q8TAP6	659 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	FOXJ1	Q92949	421 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	SIPA1	Q96FS4	1042 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	SLC39A13	Q96H72	371 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	PARD6A	Q9NPB6	346 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	NLRC4	Q9NPP4	1024 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	LIMA1	Q9UHB6	759 aa	Known RBP	10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	LGALS16	A8MUM7	142 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	DAB1	O75553	588 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	LUC7L3	O95232	432 aa	Known RBP	10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	ERBB2	P04626	1255 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	GNS	P15586	552 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	TACR2	P21452	398 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	SLC6A4	P31645	630 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	SOX5	P35711	763 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	SCNN1A	P37088	669 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	DEUP1	Q05D60	604 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	SULT2A1	Q06520	285 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	LMAN2	Q12907	356 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	SLC12A1	Q13621	1099 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	MAP7D1	Q3KQU3	841 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	PTPN20	Q4JDL3	420 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	ANO6	Q4KMQ2	910 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	FAM133B	Q5BKY9	247 aa	Known RBP	10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	DAB2IP	Q5VWQ8	1189 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	RNF43	Q68DV7	783 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	KIAA1211L	Q6NV74	962 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	LRRC31	Q6UY01	552 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	ARMCX6	Q7L4S7	300 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	SYT12	Q8IV01	421 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	AOPEP	Q8N6M6	819 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	ZNF397	Q8NF99	534 aa	Predicted RBP	10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	ERLEC1	Q96DZ1	483 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	MRGPRX1	Q96LB2	322 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	RPRD1A	Q96P16	312 aa	Predicted RBP	10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	SLC2A13	Q96QE2	648 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	NAA15	Q9BXJ9	866 aa	Known RBP	10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	NUCKS1	Q9H1E3	243 aa	Known RBP	10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	SEPT11	Q9NVA2	429 aa	Known RBP	10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	DLL3	Q9NYJ7	618 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	CYP8B1	Q9UNU6	501 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	NCKAP1	Q9Y2A7	1128 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	CKAP5	Q14008	2032 aa		10.73	□□□□□ -0.69
UBR1-207	ENST00000568782	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	ANKRD62	A6NC57	917 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	GOLGA8S	H3BPF8	625 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	SLC30A4	O14863	429 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	DNTT	P04053	509 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	SRPRA	P08240	638 aa	Known RBP	10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	MME	P08473	750 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	ZNF18	P17022	549 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	BCKDHB	P21953	392 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	TGM1	P22735	817 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	CD6	P30203	668 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	CDH5	P33151	784 aa	Predicted RBP	10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	HOXD12	P35452	270 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	NSF	P46459	744 aa	Known RBP	10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	GABRB2	P47870	512 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	SULT1E1	P49888	294 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	ATXN1	P54253	815 aa	Known RBP	10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	RPS24	P62847	133 aa	Known RBP	10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	CDR2	Q01850	454 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	ZNF33A	Q06730	810 aa		10.72	□□□□□ -0.69
UBR1-207	ENST00000568782	ZNF177	Q13360	481 aa	Predicted RBP	10.72	□□□□□ -0.69

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