RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 E9PAM4 449 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 H3BRJ5 948 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 ARNTLO00327 626 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 GFRA2O00451 464 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 SCAMP3O14828 347 aaKnown RBP12.4□□□□□ -0.42
FANCA-231ENST00000568626 HOXC11O43248 304 aaPredicted RBP12.4□□□□□ -0.42
FANCA-231ENST00000568626 CYP17A1P05093 508 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 ASGR2P07307 311 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 TCF4P15884 667 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 CTNNA2P26232 953 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 SLC6A4P31645 630 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 GJC1P36383 396 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 GAD2Q05329 585 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 SEMA3BQ13214 749 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 RUNX3Q13761 415 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 KRT81Q14533 505 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 PDK2Q15119 407 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 SMTNL2Q2TAL5 461 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 ITPRIPL2Q3MIP1 535 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 ZFYVE27Q5T4F4 411 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 MANEALQ5VSG8 457 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 C1orf228Q6PIY5 440 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 CHST9Q7L1S5 443 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 NT5DC3Q86UY8 548 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 KATNAL2Q8IYT4 538 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 ADGRG2Q8IZP9 1017 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 LGI2Q8N0V4 545 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 UBL4BQ8N7F7 174 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 FAM71BQ8TC56 605 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 RSAD2Q8WXG1 361 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 HSPH1Q92598 858 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 EXOC4Q96A65 974 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 TBC1D31Q96DN5 1066 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 ASIC4Q96FT7 647 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 ZFYVE19Q96K21 471 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 RPRD1AQ96P16 312 aaPredicted RBP12.4□□□□□ -0.42
FANCA-231ENST00000568626 ZNF670Q9BS34 389 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 RPP25Q9BUL9 199 aaKnown RBP12.4□□□□□ -0.42
FANCA-231ENST00000568626 SIK2Q9H0K1 926 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 EBF3Q9H4W6 596 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 ECT2Q9H8V3 914 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 PPARGC1AQ9UBK2 798 aaKnown RBP12.4□□□□□ -0.42
FANCA-231ENST00000568626 VANGL2Q9ULK5 521 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 DUSP12Q9UNI6 340 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 COL4A3Q01955 1670 aa12.4□□□□□ -0.42
FANCA-231ENST00000568626 BDP1A6H8Y1 2624 aa12.4□□□□□ -0.43
FANCA-231ENST00000568626 COL4A2P08572 1712 aa12.4□□□□□ -0.43
FANCA-231ENST00000568626 A0A1B0GVM2 712 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 TCAF2A6NFQ2 919 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 USP27XA6NNY8 438 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 FGF10O15520 208 aaPredicted RBP12.39□□□□□ -0.43
FANCA-231ENST00000568626 LRIG2O94898 1065 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 PENKP01210 267 aaPredicted RBP12.39□□□□□ -0.43
FANCA-231ENST00000568626 KRT1P04264 644 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 ADH5P11766 374 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 HOXC13P31276 330 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 ARL4AP40617 200 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 HCAR3P49019 387 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 CDH6P55285 790 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 TPI1P60174 286 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 DHCR24Q15392 516 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 PPP6R3Q5H9R7 873 aaPredicted RBP12.39□□□□□ -0.43
FANCA-231ENST00000568626 KCNT1Q5JUK3 1230 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 LY6G5CQ5SRR4 150 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 TRIM68Q6AZZ1 485 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 FBXL22Q6P050 247 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 CPNE8Q86YQ8 564 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 CCDC117Q8IWD4 279 aaPredicted RBP12.39□□□□□ -0.43
FANCA-231ENST00000568626 UBALD2Q8IYN6 164 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 GJD3Q8N144 294 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 ST13P5Q8NFI4 369 aaPredicted RBP12.39□□□□□ -0.43
FANCA-231ENST00000568626 DDI1Q8WTU0 396 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 TMA16Q96EY4 203 aaKnown RBP12.39□□□□□ -0.43
FANCA-231ENST00000568626 RBM41Q96IZ5 413 aaKnown RBP12.39□□□□□ -0.43
FANCA-231ENST00000568626 PRICKLE1Q96MT3 831 aaPredicted RBP12.39□□□□□ -0.43
FANCA-231ENST00000568626 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 ZYG11BQ9C0D3 744 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 LINC00597Q9H2U6 94 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 CATSPERBQ9H7T0 1116 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 HPS4Q9NQG7 708 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 TMPRSS4Q9NRS4 437 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 GPATCH2LQ9NWQ4 482 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 STIM2Q9P246 746 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 HYOU1Q9Y4L1 999 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 PCDHA3Q9Y5H8 950 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 TICRRQ7Z2Z1 1910 aa12.39□□□□□ -0.43
FANCA-231ENST00000568626 GOLGA6L7A0A1B0GV03 622 aa12.38□□□□□ -0.43
FANCA-231ENST00000568626 LRRD1A4D1F6 860 aa12.38□□□□□ -0.43
FANCA-231ENST00000568626 DRGXA6NNA5 263 aa12.38□□□□□ -0.43
FANCA-231ENST00000568626 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.38□□□□□ -0.43
FANCA-231ENST00000568626 EEF2KO00418 725 aaKnown RBP12.38□□□□□ -0.43
FANCA-231ENST00000568626 CLDN11O75508 207 aa12.38□□□□□ -0.43
FANCA-231ENST00000568626 FTCDO95954 541 aa12.38□□□□□ -0.43
FANCA-231ENST00000568626 GLULP15104 373 aa12.38□□□□□ -0.43
FANCA-231ENST00000568626 ARSAP15289 507 aa12.38□□□□□ -0.43
FANCA-231ENST00000568626 RHOQP17081 205 aa12.38□□□□□ -0.43
FANCA-231ENST00000568626 GGCXP38435 758 aa12.38□□□□□ -0.43
FANCA-231ENST00000568626 CETN2P41208 172 aa12.38□□□□□ -0.43
FANCA-231ENST00000568626 EIF2DP41214 584 aaKnown RBP12.38□□□□□ -0.43
FANCA-231ENST00000568626 VCPP55072 806 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms