RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ZKSCAN8Q15776 578 aaPredicted RBP18.67■□□□□ 0.58
SMPD3-211ENST00000568373 PARP6Q2NL67 630 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 LRRC6Q86X45 466 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 COLGALT2Q8IYK4 626 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 ZNF567Q8N184 647 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 MPP5Q8N3R9 675 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 CEP41Q9BYV8 373 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 F5H423 210 aaPredicted RBP18.66■□□□□ 0.58
SMPD3-211ENST00000568373 IGLV3-25P01717 112 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 MT-ND3P03897 115 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 LIG3P49916 1009 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 SLC5A3P53794 718 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 FAAP100Q0VG06 881 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 RGS9BPQ6ZS82 235 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 CTAGE3PQ8IX95 158 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 NPWQ8N729 165 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 PPM1NQ8N819 430 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 PDCD7Q8N8D1 485 aaKnown RBP18.66■□□□□ 0.58
SMPD3-211ENST00000568373 BANPQ8N9N5 519 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 GSDMBQ8TAX9 411 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 CCT6BQ92526 530 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 HMX1Q9NP08 348 aaPredicted RBP18.66■□□□□ 0.58
SMPD3-211ENST00000568373 TBC1D13Q9NVG8 400 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 IGSF9Q9P2J2 1179 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 KANSL3Q9P2N6 904 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 ZNF180Q9UJW8 692 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 GRID1Q9ULK0 1009 aa18.66■□□□□ 0.58
SMPD3-211ENST00000568373 USP15Q9Y4E8 981 aaPredicted RBP18.66■□□□□ 0.58
SMPD3-211ENST00000568373 TNFRSF10BO14763 440 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 OAZ2O95190 189 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 PSMB4P28070 264 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 GRIK1P39086 918 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 EIF4EBP2Q13542 120 aaPredicted RBP18.65■□□□□ 0.58
SMPD3-211ENST00000568373 PDK4Q16654 411 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 HHATQ5VTY9 493 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 PPM1EQ8WY54 764 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 RNF34Q969K3 372 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 FTHL17Q9BXU8 183 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 SNX10Q9Y5X0 201 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 CCT8L1PA6NM43 557 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 CXorf49A8MYA2 514 aaPredicted RBP18.65■□□□□ 0.58
SMPD3-211ENST00000568373 KCNK1O00180 336 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 ARVCFO00192 962 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 LRIG2O94898 1065 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 OR4Q2P0C623 313 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 EPHB2P29323 1055 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 OR1G1P47890 313 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 PPIDQ08752 370 aaKnown RBP18.65■□□□□ 0.58
SMPD3-211ENST00000568373 SLC39A12Q504Y0 691 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 LRRC8BQ6P9F7 803 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 LVRNQ6Q4G3 990 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 BRD8Q9H0E9 1235 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 KDM4CQ9H3R0 1056 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 ABCC13Q9NSE7 274 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 PCDHA11Q9Y5I1 949 aa18.65■□□□□ 0.58
SMPD3-211ENST00000568373 GOLGA8RI6L899 631 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 TM9SF1O15321 606 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 SUN1O94901 812 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 MX2P20592 715 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 SERPINB6P35237 376 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 IFRD2Q12894 506 aaPredicted RBP18.64■□□□□ 0.57
SMPD3-211ENST00000568373 MTFR1Q15390 333 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 TTC39BQ5VTQ0 682 aaPredicted RBP18.64■□□□□ 0.57
SMPD3-211ENST00000568373 LRRC8DQ7L1W4 858 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 SPATA21Q7Z572 469 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 HDAC11Q96DB2 347 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 STAMBPL1Q96FJ0 436 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 KLF6Q99612 283 aaPredicted RBP18.64■□□□□ 0.57
SMPD3-211ENST00000568373 TRIM56Q9BRZ2 755 aaKnown RBP18.64■□□□□ 0.57
SMPD3-211ENST00000568373 ZCWPW1Q9H0M4 648 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 OSBPL2Q9H1P3 480 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 RASSF4Q9H2L5 321 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 SMYD2Q9NRG4 433 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 IRAK2O43187 625 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 FSBPO95073 299 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 PTPN3P26045 913 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 CYP2C18P33260 490 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 GALNT2Q10471 571 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 LACTB2Q53H82 288 aaPredicted RBP18.64■□□□□ 0.57
SMPD3-211ENST00000568373 BTBD8Q5XKL5 378 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 PID1Q7Z2X4 250 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 SLAIN1Q8ND83 568 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 TCP10LQ8TDR4 215 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 GRAMD1AQ96CP6 724 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 SERAC1Q96JX3 654 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 FAM193BQ96PV7 902 aaPredicted RBP18.64■□□□□ 0.57
SMPD3-211ENST00000568373 PITPNM3Q9BZ71 974 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 TMEM161AQ9NX61 479 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 ARHGEF38Q9NXL2 777 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 KLHL8Q9P2G9 620 aaPredicted RBP18.64■□□□□ 0.57
SMPD3-211ENST00000568373 DNAJB4Q9UDY4 337 aa18.64■□□□□ 0.57
SMPD3-211ENST00000568373 PRG3Q9Y2Y8 225 aaPredicted RBP18.64■□□□□ 0.57
SMPD3-211ENST00000568373 NUP205Q92621 2012 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 SDR42E2A6NKP2 422 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 FAM159BA6NKW6 160 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 MTSS1O43312 755 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 FAM155BO75949 473 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 COL6A1P12109 1028 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 SELPP16109 830 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 SLC18A2Q05940 514 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms