RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CEP76Q8TAP6 659 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 DQX1Q8TE96 717 aaKnown RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 PIGKQ92643 395 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 TCEAL3Q969E4 200 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 SLC39A13Q96H72 371 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 PPP1R13BQ96KQ4 1090 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 BTN2A3PQ96KV6 586 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 FCRL2Q96LA5 508 aaPredicted RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 NOX5Q96PH1 765 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 GBP4Q96PP9 640 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 EDEM2Q9BV94 578 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 NUSAP1Q9BXS6 441 aaKnown RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 CIPCQ9C0C6 399 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 TMEM245Q9H330 911 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 SMOC1Q9H4F8 434 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 PRDM16Q9HAZ2 1276 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 SIX2Q9NPC8 291 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 ACP6Q9NPH0 428 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 RXFP3Q9NSD7 469 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 ABCB8Q9NUT2 735 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 ASNSD1Q9NWL6 643 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 EVLQ9UI08 416 aaPredicted RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 CYTH4Q9UIA0 394 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 GGA2Q9UJY4 613 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 DNAJC12Q9UKB3 198 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 PILRBQ9UKJ0 227 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 CLEC4EQ9ULY5 219 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 CYP8B1Q9UNU6 501 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 PLA2G4CQ9UP65 541 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 NAALADL1Q9UQQ1 740 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 CEP83Q9Y592 693 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 GOLGA6L7A0A1B0GV03 622 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 PATE3B3GLJ2 98 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 GOLGA6L22H0YM25 854 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 FOXN3O00409 490 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 PES1O00541 588 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 TM4SF5O14894 197 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 HSF2BPO75031 334 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 NDUFS2O75306 463 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 TRUB2O95900 331 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 MOCS2O96007 188 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 IGLV3-19P01714 112 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 EPHX1P07099 455 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 TPM2P07951 284 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ADRB1P08588 477 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 DLDP09622 509 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 SLC2A3P11169 496 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ACADMP11310 421 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 PABPC1P11940 636 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 POLR2EP19388 210 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 ITPKAP23677 461 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 PRKCHP24723 683 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 CD6P30203 668 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 OXTRP30559 389 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 CCR1P32246 355 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 CLCN1P35523 988 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 KRT9P35527 623 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 TPMTP51580 245 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 COPAP53621 1224 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 IRX4P78413 519 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ZNF33AQ06730 810 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 KCNMA1Q12791 1236 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 MTA1Q13330 715 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 EIF4EBP2Q13542 120 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 CAMK2GQ13555 558 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 CDH18Q13634 790 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 RAPGEF1Q13905 1077 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 DUOXA1Q1HG43 343 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 FNDC3BQ53EP0 1204 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 HSP90AA4PQ58FG1 418 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 DCAF6Q58WW2 860 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 TRIM61Q5EBN2 209 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 TCP11X2Q5H9J9 407 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 MS4A13Q5J8X5 152 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 PPM1JQ5JR12 505 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 SYCP2LQ5T4T6 812 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 KLHDC7AQ5VTJ3 777 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 TTC39BQ5VTQ0 682 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 DAB2IPQ5VWQ8 1189 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 SYPL2Q5VXT5 272 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 MBLAC2Q68D91 279 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 NADSYN1Q6IA69 706 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 DPY19L2P1Q6NXN4 242 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 KIAA1324Q6UXG2 1013 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 RBM43Q6ZSC3 357 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 C11orf57Q6ZUT1 292 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 FAM183BPQ6ZVS7 135 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 CHST9Q7L1S5 443 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ARMCX6Q7L4S7 300 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ADIPOR2Q86V24 386 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 SLC47A2Q86VL8 602 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 TMPRSS6Q8IU80 811 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ZDHHC17Q8IUH5 632 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 PASD1Q8IV76 773 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 MFN1Q8IWA4 741 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 CCDC117Q8IWD4 279 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 FAM71AQ8IYT1 594 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 WDTC1Q8N5D0 677 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ZNF454Q8N9F8 522 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 TMEM35BQ8NCS4 154 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms